RNA–Protein interactions for RNA: ENST00000508117.6

CAST-220, Transcript of calpastatin, humanhuman

TSL 5

Gene CAST, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-220ENST00000508117 AGBL4Q5VU57 503 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 RNF219Q5W0B1 726 aaPredicted RBP9.42□□□□□ -0.9
CAST-220ENST00000508117 NADSYN1Q6IA69 706 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 ZCCHC8Q6NZY4 707 aaKnown RBP9.42□□□□□ -0.9
CAST-220ENST00000508117 RBM44Q6ZP01 1051 aaKnown RBP9.42□□□□□ -0.9
CAST-220ENST00000508117 ABI3BPQ7Z7G0 1075 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 CARNMT1Q8N4J0 409 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 CCDC150Q8NCX0 1101 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 TAS1R2Q8TE23 839 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 FRS2Q8WU20 508 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 NDRG1Q92597 394 aaKnown RBP9.42□□□□□ -0.9
CAST-220ENST00000508117 EDEM1Q92611 657 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 DHX58Q96C10 678 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 SGF29Q96ES7 293 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 USP28Q96RU2 1077 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 SLC6A16Q9GZN6 736 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 KCTD10Q9H3F6 313 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 GPR27Q9NS67 375 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 STIM2Q9P246 746 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 SALL4Q9UJQ4 1053 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 PPM1HQ9ULR3 514 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 FRMD4BQ9Y2L6 1034 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 PCDHGA7Q9Y5G6 932 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 NBASA2RRP1 2371 aa9.42□□□□□ -0.9
CAST-220ENST00000508117 CLEC18AA5D8T8 446 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 C1QTNF3-AMACRE9PGA6 284 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 TULP2O00295 520 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 TPP1O14773 563 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 MCF2LO15068 1137 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 PPP6R2O75170 966 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 CD2BP2O95400 341 aaKnown RBP9.41□□□□□ -0.9
CAST-220ENST00000508117 NR3C1P04150 777 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 HNRNPA2B1P22626 353 aaKnown RBP9.41□□□□□ -0.9
CAST-220ENST00000508117 VAMP7P51809 220 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 PLK1P53350 603 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 TBX4P57082 545 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 DAOAP59103 153 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 HNRNPKP61978 463 aaKnown RBP eCLIP9.41□□□□□ -0.9
CAST-220ENST00000508117 CEBPZQ03701 1054 aaKnown RBP9.41□□□□□ -0.9
CAST-220ENST00000508117 CCDC15Q0P6D6 951 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 ADIGQ0VDE8 80 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 BST2Q10589 180 aaKnown RBP9.41□□□□□ -0.9
CAST-220ENST00000508117 CNTN1Q12860 1018 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 EIF3IQ13347 325 aaKnown RBP9.41□□□□□ -0.9
CAST-220ENST00000508117 NFIL3Q16649 462 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 ZSCAN23Q3MJ62 389 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 MS4A13Q5J8X5 152 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 FAM173BQ6P4H8 233 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 CLEC18BQ6UXF7 455 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 USP53Q70EK8 1073 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 INTS8Q75QN2 995 aaKnown RBP9.41□□□□□ -0.9
CAST-220ENST00000508117 SIX6OS1Q8N1H7 587 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 CLEC18CQ8NCF0 446 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 OR8D1Q8WZ84 308 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 IRGQQ8WZA9 623 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 RPL10LQ96L21 214 aaKnown RBP9.41□□□□□ -0.9
CAST-220ENST00000508117 ARHGAP9Q9BRR9 750 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 OSBPL2Q9H1P3 480 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 CISHQ9NSE2 258 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 CEP83Q9Y592 693 aa9.41□□□□□ -0.9
CAST-220ENST00000508117 TRPM6Q9BX84 2022 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 SPTBN1Q01082 2364 aaKnown RBP9.4□□□□□ -0.9
CAST-220ENST00000508117 CCDC187A0A096LP49 1063 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.4□□□□□ -0.9
CAST-220ENST00000508117 ATP9BO43861 1147 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 NOBOXO60393 691 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 PPFIA2O75334 1257 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 TNFSF15O95150 251 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 SETSIPP0DME0 302 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 CR2P20023 1033 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 AKT2P31751 481 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 GTF2H1P32780 548 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 GCLMP48507 274 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 METAP1P53582 386 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 TAS2R38P59533 333 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 PPP3CAQ08209 521 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 STK4Q13043 487 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 ZNF177Q13360 481 aaPredicted RBP9.4□□□□□ -0.9
CAST-220ENST00000508117 ZNF284Q2VY69 593 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 DCAF6Q58WW2 860 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 MMS22LQ6ZRQ5 1243 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 HORMAD1Q86X24 394 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 APCDD1Q8J025 514 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 SLC22A18ASQ8N1D0 253 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 LINC00301Q8NCQ3 95 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 OR13H1Q8NG92 308 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 ERCC4Q92889 916 aaPredicted RBP9.4□□□□□ -0.9
CAST-220ENST00000508117 MYEOVQ96EZ4 313 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 LIN37Q96GY3 246 aaPredicted RBP9.4□□□□□ -0.9
CAST-220ENST00000508117 SLC39A13Q96H72 371 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 FCRL2Q96LA5 508 aaPredicted RBP9.4□□□□□ -0.9
CAST-220ENST00000508117 PPP1R9BQ96SB3 815 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 TMEM8AQ9HCN3 771 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 HESX1Q9UBX0 185 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 TSPAN16Q9UKR8 245 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 SARDHQ9UL12 918 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 TRAF3IP3Q9Y228 551 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 TLR6Q9Y2C9 796 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 CA5BQ9Y2D0 317 aa9.4□□□□□ -0.9
CAST-220ENST00000508117 HS3ST3A1Q9Y663 406 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms