RNA–Protein interactions for RNA: ENST00000507162.1

VCAN-207, Transcript of versican, humanhuman

TSL 3

Gene VCAN, Length 766 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-207ENST00000507162 ZNF233A6NK53 670 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 TPP1O14773 563 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 SLC7A4O43246 635 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 GCATO75600 419 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 PCDH8O95206 1070 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 LDLRP01130 860 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 FAM200BP0CF97 657 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 NME1P15531 152 aaKnown RBP7.45□□□□□ -1.22
VCAN-207ENST00000507162 ZNF18P17022 549 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 GARTP22102 1010 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 HNRNPA2B1P22626 353 aaKnown RBP7.45□□□□□ -1.22
VCAN-207ENST00000507162 CCKBRP32239 447 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 MYL6P60660 151 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 ECT2LQ008S8 904 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 SURF1Q15526 300 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 BMT2Q1RMZ1 405 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 ZXDCQ2QGD7 858 aaPredicted RBP7.45□□□□□ -1.22
VCAN-207ENST00000507162 PRRT3Q5FWE3 981 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 BMP2KLQ5H9B9 411 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 PHF19Q5T6S3 580 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 PPP1R26Q5T8A7 1209 aaPredicted RBP7.45□□□□□ -1.22
VCAN-207ENST00000507162 SP5Q6BEB4 398 aaPredicted RBP7.45□□□□□ -1.22
VCAN-207ENST00000507162 GCNT7Q6ZNI0 430 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 MMS22LQ6ZRQ5 1243 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 TIPARPQ7Z3E1 657 aaKnown RBP7.45□□□□□ -1.22
VCAN-207ENST00000507162 SKAP1Q86WV1 359 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 SFR1Q86XK3 245 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 DCP2Q8IU60 420 aaKnown RBP7.45□□□□□ -1.22
VCAN-207ENST00000507162 MFN1Q8IWA4 741 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 MCEMP1Q8IX19 187 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 FAM217AQ8IXS0 508 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 CACNA2D3Q8IZS8 1091 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 MMP21Q8N119 569 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 GPD1LQ8N335 351 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 CARNMT1Q8N4J0 409 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 KCTD17Q8N5Z5 321 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 C12orf29Q8N999 325 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 GPBAR1Q8TDU6 330 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 NANOS1Q8WY41 292 aaKnown RBP7.45□□□□□ -1.22
VCAN-207ENST00000507162 CCDC74AQ96AQ1 378 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 ELMO3Q96BJ8 720 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 TCTN2Q96GX1 697 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 BMFQ96LC9 184 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 FOXP1Q9H334 677 aaPredicted RBP7.45□□□□□ -1.22
VCAN-207ENST00000507162 LRRN3Q9H3W5 708 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 ST6GALNAC4Q9H4F1 302 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 MRPL44Q9H9J2 332 aaKnown RBP7.45□□□□□ -1.22
VCAN-207ENST00000507162 CSNK1G1Q9HCP0 422 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 AKAP7Q9P0M2 348 aaPredicted RBP7.45□□□□□ -1.22
VCAN-207ENST00000507162 SPASTQ9UBP0 616 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 RABGEF1Q9UJ41 708 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 ERRFI1Q9UJM3 462 aaPredicted RBP7.45□□□□□ -1.22
VCAN-207ENST00000507162 INTS6Q9UL03 887 aaKnown RBP7.45□□□□□ -1.22
VCAN-207ENST00000507162 SARDHQ9UL12 918 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 PPM1HQ9ULR3 514 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 DOLKQ9UPQ8 538 aa7.45□□□□□ -1.22
VCAN-207ENST00000507162 SPTY2D1-AS1A0A0U1RR47 76 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 A0A1W2PQM1 296 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 POM121BA6NF01 834 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 A6NNZ2 444 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 TCP11X1B4DZS4 312 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 HHLA1C9JL84 531 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 MKRN2OSH3BPM6 223 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 YY2O15391 372 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 BNIP3LO60238 219 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 PHACTR2O75167 634 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 MOCS3O95396 460 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 SRPRAP08240 638 aaKnown RBP7.44□□□□□ -1.22
VCAN-207ENST00000507162 CCL4P13236 92 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 NNMTP40261 264 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 KIF11P52732 1056 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 CDC20Q12834 499 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 PDE1CQ14123 709 aaPredicted RBP7.44□□□□□ -1.22
VCAN-207ENST00000507162 ARID5BQ14865 1188 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 TCEA2Q15560 299 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 ZNF284Q2VY69 593 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 ACCSLQ4AC99 568 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 TMEM119Q4V9L6 283 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 ADGRF1Q5T601 910 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 L1TD1Q5T7N2 865 aaKnown RBP7.44□□□□□ -1.22
VCAN-207ENST00000507162 AGBL4Q5VU57 503 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 FAM46CQ5VWP2 391 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 TCTN3Q6NUS6 607 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 CLEC20AQ6ZU45 233 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 ABI3BPQ7Z7G0 1075 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 PARGQ86W56 976 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 HORMAD1Q86X24 394 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 CBWD2Q8IUF1 395 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 CCDC117Q8IWD4 279 aaPredicted RBP7.44□□□□□ -1.22
VCAN-207ENST00000507162 CCDC13Q8IYE1 715 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 RBFAQ8N0V3 343 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 TTC13Q8NBP0 860 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 TMEM159Q96B96 161 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 CCDC127Q96BQ5 260 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 PLD4Q96BZ4 506 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 HVCN1Q96D96 273 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 CALML4Q96GE6 196 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 C8orf76Q96K31 380 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 C5orf34Q96MH7 638 aa7.44□□□□□ -1.22
VCAN-207ENST00000507162 TCEAL2Q9H3H9 227 aaPredicted RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms