RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 EDARQ9UNE0 448 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 SNX24Q9Y343 169 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 C2orf16Q68DN1 1984 aa6.11□□□□□ -1.43
SCLT1-207ENST00000506233 PIK3R2O00459 728 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 CLDN5O00501 218 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 BAIAP3O94812 1187 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 MYBL1P10243 752 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 ITGB8P26012 769 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 ECI1P42126 302 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 TUBB4BP68371 445 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 ROR1Q01973 937 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 RING1Q06587 406 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 DSC1Q08554 894 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 PDE1CQ14123 709 aaPredicted RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 DHX34Q14147 1143 aaKnown RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 PPP2R5DQ14738 602 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 CCNG2Q16589 344 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 CCDC92Q53HC0 331 aaPredicted RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 GLRA4Q5JXX5 417 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 NCBP2-AS2Q69YL0 99 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 C8orf74Q6P047 294 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 SLC27A1Q6PCB7 646 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 CLEC20AQ6ZU45 233 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 KIF18BQ86Y91 864 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 CISD2Q8N5K1 135 aaKnown RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 OR6Y1Q8NGX8 325 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 SH3RF2Q8TEC5 729 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 TAF4BQ92750 862 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 PAWRQ96IZ0 340 aaKnown RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 ZNF518BQ9C0D4 1074 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 PABPC3Q9H361 631 aaKnown RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 CDC42EP4Q9H3Q1 356 aaKnown RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 DEF6Q9H4E7 631 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 LGALS13Q9UHV8 139 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 TSPAN16Q9UKR8 245 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 BARX2Q9UMQ3 279 aaPredicted RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 MIF4GDA9UHW6 222 aaKnown RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 DDHD2O94830 711 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 SNRPB2P08579 225 aaKnown RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 LCP1P13796 627 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 WARSP23381 471 aaKnown RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 TBXAS1P24557 533 aaPredicted RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 ATICP31939 592 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 CLCNKBP51801 687 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 DGKDQ16760 1214 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 SMTNL2Q2TAL5 461 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 ALS2CLQ60I27 953 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 OVCH1Q7RTY7 1134 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 PIGWQ7Z7B1 504 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 PRPF39Q86UA1 669 aaKnown RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 NKAIN3Q8N8D7 197 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 NETO2Q8NC67 525 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 OR6J1Q8NGC5 347 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 MDM1Q8TC05 714 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 DCAKDQ8WVC6 231 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 IFT74Q96LB3 600 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 ALS2CR12Q96Q35 445 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 C20orf27Q9GZN8 174 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 C2orf40Q9H1Z8 148 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 NOL6Q9H6R4 1146 aaKnown RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 PCDHB4Q9Y5E5 795 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 TEX264Q9Y6I9 313 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 DENND4AQ7Z401 1863 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 CELSR3Q9NYQ7 3312 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 M0QZQ0 153 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 RGS13O14921 159 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 TRAPPC3O43617 180 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 ULK1O75385 1050 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 IL18RAPO95256 599 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 HMGCRP04035 888 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 KRT13P13646 458 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 TNNI1P19237 187 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 DRD4P21917 467 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 TMOD1P28289 359 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 HOXC13P31276 330 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 FOXN2P32314 431 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 GRIA1P42261 906 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 RPIAP49247 311 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 SESN3P58005 492 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 CUL1Q13616 776 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 BBS9Q3SYG4 887 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 FAM133BQ5BKY9 247 aaKnown RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 PPM1JQ5JR12 505 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 KCTD11Q693B1 232 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 TTC19Q6DKK2 380 aaPredicted RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 RGMBQ6NW40 437 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 STXBP4Q6ZWJ1 553 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 TMEM173Q86WV6 379 aaPredicted RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 MCATQ8IVS2 390 aaKnown RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 ZC3H7AQ8IWR0 971 aaKnown RBP6.1□□□□□ -1.43
SCLT1-207ENST00000506233 KCTD13Q8WZ19 329 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 LPPQ93052 612 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 TADA1Q96BN2 335 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 HPDLQ96IR7 371 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 HEMGNQ9BXL5 484 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 NKX2-4Q9H2Z4 354 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 IL37Q9NZH6 218 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 WHRNQ9P202 907 aa6.1□□□□□ -1.43
SCLT1-207ENST00000506233 POLR3GO15318 223 aaPredicted RBP6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms