RNA–Protein interactions for RNA: ENST00000504782.5

RNF4-206, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-206ENST00000504782 SLC25A52Q3SY17 297 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 LINGO4Q6UY18 593 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 TFAP2DQ7Z6R9 452 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 ADAT2Q7Z6V5 191 aaKnown RBP13.13□□□□□ -0.31
RNF4-206ENST00000504782 GLRX5Q86SX6 157 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 GATAD2AQ86YP4 633 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 ZDHHC17Q8IUH5 632 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 SH2D3CQ8N5H7 860 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 SLC30A5Q8TAD4 765 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 ENOX1Q8TC92 643 aaKnown RBP13.13□□□□□ -0.31
RNF4-206ENST00000504782 FAM131CQ96AQ9 280 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 PGAP3Q96FM1 320 aaPredicted RBP13.13□□□□□ -0.31
RNF4-206ENST00000504782 MUC3BQ9H195 1237 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 CAAP1Q9H8G2 361 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 NLRC4Q9NPP4 1024 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 AASDHPPTQ9NRN7 309 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 FANCLQ9NW38 375 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 ARHGAP20Q9P2F6 1191 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 SLC25A13Q9UJS0 675 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 PPM1HQ9ULR3 514 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 PCDHGB2Q9Y5G2 931 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 ACTL7AQ9Y615 435 aa13.13□□□□□ -0.31
RNF4-206ENST00000504782 CABIN1Q9Y6J0 2220 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 CFAP47Q6ZTR5 3102 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 TBC1D3DA0A087WVF3 549 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 TBC1D3IA0A087WXS9 549 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 TBC1D3EA0A087X179 549 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 TBC1D3KA0A087X1G2 549 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 TBC1D3FA6NER0 549 aaPredicted RBP13.12□□□□□ -0.31
RNF4-206ENST00000504782 SRRM3A6NNA2 597 aaPredicted RBP13.12□□□□□ -0.31
RNF4-206ENST00000504782 TBC1D3LB9A6J9 549 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 E9PAM4 449 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 CBX4O00257 560 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 VILLO15195 856 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 FLRT2O43155 660 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 SRGAP2O75044 1071 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 TRIM16O95361 564 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 RHOCP08134 193 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 TBC1D3HP0C7X1 549 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 RRM1P23921 792 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 VASPP50552 380 aaPredicted RBP13.12□□□□□ -0.31
RNF4-206ENST00000504782 CCR5P51681 352 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 JAM2P57087 298 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 TAS2R38P59533 333 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 POLR2FP61218 127 aaKnown RBP13.12□□□□□ -0.31
RNF4-206ENST00000504782 FMO1Q01740 532 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 BRMS1LQ5PSV4 323 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 AGBL4Q5VU57 503 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 TBC1D3GQ6DHY5 549 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 SMYD5Q6GMV2 418 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 TBC1D3CQ6IPX1 549 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 FAM131BQ86XD5 332 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 TBC1D3Q8IZP1 549 aaPredicted RBP13.12□□□□□ -0.31
RNF4-206ENST00000504782 CHST14Q8NCH0 376 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 OR7D4Q8NG98 312 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 JOSD2Q8TAC2 188 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 PIP4K2CQ8TBX8 421 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 ZCCHC14Q8WYQ9 949 aaKnown RBP13.12□□□□□ -0.31
RNF4-206ENST00000504782 SPAG5Q96R06 1193 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 PCDHB18PQ96TA0 734 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 ACE2Q9BYF1 805 aaPredicted RBP13.12□□□□□ -0.31
RNF4-206ENST00000504782 METTL5Q9NRN9 209 aaKnown RBP13.12□□□□□ -0.31
RNF4-206ENST00000504782 FAM207AQ9NSI2 230 aaPredicted RBP13.12□□□□□ -0.31
RNF4-206ENST00000504782 RRN3Q9NYV6 651 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 ZNF212Q9UDV6 495 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 VPS51Q9UID3 782 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 STAP1Q9ULZ2 295 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 CA5BQ9Y2D0 317 aa13.12□□□□□ -0.31
RNF4-206ENST00000504782 CHD5Q8TDI0 1954 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 IGF2RP11717 2491 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 IGLV3-10A0A075B6K4 115 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 A0A1B0GTQ1 180 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 MCF2LO15068 1137 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 LATO43561 262 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 PLRG1O43660 514 aaKnown RBP13.11□□□□□ -0.31
RNF4-206ENST00000504782 ZNF821O75541 412 aaPredicted RBP13.11□□□□□ -0.31
RNF4-206ENST00000504782 DKK1O94907 266 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 ENDOD1O94919 500 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 CYP1A1P04798 512 aaPredicted RBP13.11□□□□□ -0.31
RNF4-206ENST00000504782 CD38P28907 300 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 SCNN1AP37088 669 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 CCT8P50990 548 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 OXCT1P55809 520 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 C21orf59P57076 290 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 ATP11AP98196 1134 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 C15orf59Q2T9L4 293 aaPredicted RBP13.11□□□□□ -0.31
RNF4-206ENST00000504782 RBM43Q6ZSC3 357 aaKnown RBP13.11□□□□□ -0.31
RNF4-206ENST00000504782 SPATS2Q86XZ4 545 aaKnown RBP13.11□□□□□ -0.31
RNF4-206ENST00000504782 OR2A12Q8NGT7 310 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 OR8D1Q8WZ84 308 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 ARRDC3Q96B67 414 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 SERAC1Q96JX3 654 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 C1orf74Q96LT6 269 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 TNKS2Q9H2K2 1166 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 HS3ST2Q9Y278 367 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 SIK3Q9Y2K2 1263 aa13.11□□□□□ -0.31
RNF4-206ENST00000504782 PCDHGA12O60330 932 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 LSM8O95777 96 aaKnown RBP13.1□□□□□ -0.31
RNF4-206ENST00000504782 F9P00740 461 aa13.1□□□□□ -0.31
RNF4-206ENST00000504782 RDXP35241 583 aaKnown RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms