RNA–Protein interactions for RNA: ENST00000504220.6

PCDH11X-208, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,017 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-208ENST00000504220 MARVELD3Q96A59 401 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 THAP11Q96EK4 314 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TMEM80Q96HE8 168 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PRMT6Q96LA8 375 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 PURBQ96QR8 312 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 RBM15Q96T37 977 aaKnown RBP eCLIP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TP63Q9H3D4 680 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TRIT1Q9H3H1 467 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 AGO3Q9H9G7 860 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 SPATA6Q9NWH7 488 aaPredicted RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 SLC9A2Q9UBY0 812 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TEKT2Q9UIF3 430 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 ABT1Q9ULW3 272 aaKnown RBP3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 TRAF3IP3Q9Y228 551 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 IPPQ9Y573 584 aa3.75□□□□□ -1.81
PCDH11X-208ENST00000504220 A0A1B0GTH6 734 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 LAD1O00515 517 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 PFDN6O15212 129 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 EXTL3O43909 919 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 MT-CO1P00395 513 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 CAPNS1P04632 268 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 HK1P19367 917 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SOX5P35711 763 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 GPR3P46089 330 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 PCYT1AP49585 367 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 RGS7P49802 495 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 STAT2P52630 851 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 CDH6P55285 790 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SH3BGRP55822 239 aaPredicted RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ERVK-24P63145 666 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 IKZF1Q13422 519 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 DCTN2Q13561 401 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 TFDP1Q14186 410 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ERV3-1Q14264 604 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SEMA3AQ14563 771 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 TEAD4Q15561 434 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 GSTA3Q16772 222 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 MAJINQ3KP22 176 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 FASTKD1Q53R41 847 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 KIAA1755Q5JYT7 1200 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 C12orf60Q5U649 245 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 NIPAL1Q6NVV3 410 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SPOCD1Q6ZMY3 1216 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 PDZD4Q76G19 769 aaPredicted RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 RNF180Q86T96 592 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ZSWIM9Q86XI8 627 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 FBXL13Q8NEE6 735 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ZSWIM2Q8NEG5 633 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 FANK1Q8TC84 345 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 NMD3Q96D46 503 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 NRBF2Q96F24 287 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 CEP19Q96LK0 163 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 PI4K2AQ9BTU6 479 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 PACSIN1Q9BY11 444 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 EDEM3Q9BZQ6 932 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 DHX35Q9H5Z1 703 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ESRP2Q9H6T0 727 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 MCCC2Q9HCC0 563 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 RAVER2Q9HCJ3 691 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 GLRX2Q9NS18 164 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 TBC1D22BQ9NU19 505 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 SLC39A1Q9NY26 324 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 GPRC5DQ9NZD1 345 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 HSPBP1Q9NZL4 362 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 LUZP4Q9P127 313 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 STX18Q9P2W9 335 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 REV1Q9UBZ9 1251 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 KLQ9UEF7 1012 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 HAO1Q9UJM8 370 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 STRIP2Q9ULQ0 834 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 DDX52Q9Y2R4 599 aaKnown RBP eCLIP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 TMX2Q9Y320 296 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 MRPS23Q9Y3D9 190 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 MRPL42Q9Y6G3 142 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 WDR19Q8NEZ3 1342 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 MAST2Q6P0Q8 1798 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 A0A087X0T9 212 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 HEATR9A2RTY3 570 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 MYMKA6NI61 221 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 CENPBD1B2RD01 187 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 ADCY3O60266 1144 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 GPX5O75715 221 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 CBR3O75828 277 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 PIAS1O75925 651 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 FAM228BP0C875 321 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 CD44P16070 742 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 GAP43P17677 238 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 HLA-DPA1P20036 260 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 NR4A1P22736 598 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 GSTM2P28161 218 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 VAMP7P51809 220 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 BCAR1P56945 870 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 RACK1P63244 317 aaKnown RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 INSM1Q01101 510 aaPredicted RBP3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 KRT76Q01546 638 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 NME3Q13232 169 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 PTPAQ15257 358 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 PARP6Q2NL67 630 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 QRICH1Q2TAL8 776 aa3.74□□□□□ -1.81
PCDH11X-208ENST00000504220 CDKL4Q5MAI5 379 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms