RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 LTA4HP09960 611 aaKnown RBP16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 ACADMP11310 421 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 NEK3P51956 506 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 WSCD1Q658N2 575 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 WDR48Q8TAF3 677 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 SPATA20Q8TB22 786 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 NMD3Q96D46 503 aaKnown RBP16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 APOL4Q9BPW4 351 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 CCDC3Q9BQI4 270 aa16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 GLIS2Q9BZE0 524 aaPredicted RBP16.79■□□□□ 0.28
PCDHA1-203ENST00000504120 ZNF839A8K0R7 811 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 EPHB6O15197 1021 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 FAM20BO75063 409 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 FSBPO95073 299 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 PABPC1P11940 636 aaKnown RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 DGKAP23743 735 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 RPL22P35268 128 aaKnown RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 PIWIL2Q8TC59 973 aaKnown RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 NFKBIZQ9BYH8 718 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 SAE1Q9UBE0 346 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 CDH9Q9ULB4 789 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 TMCO1Q9UM00 188 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 SATB2Q9UPW6 733 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 PHGDHO43175 533 aaKnown RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 ZBTB14O43829 449 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 USP39Q53GS9 565 aaKnown RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 OTUD3Q5T2D3 398 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 USP50Q70EL3 339 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 LPCAT2Q7L5N7 544 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 DSG4Q86SJ6 1040 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 LRRC49Q8IUZ0 686 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 OR52K1Q8NGK4 314 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 UTP15Q8TED0 518 aaKnown RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 USP6NLQ92738 828 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 TRAPPC9Q96Q05 1148 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 ZNF670Q9BS34 389 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 SNRNP25Q9BV90 132 aaKnown RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 DUSP12Q9UNI6 340 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 C2CD2Q9Y426 696 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 ATAD3BQ5T9A4 648 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 NPNTQ6UXI9 565 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 STAG3L4Q8TBR4 150 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 TRPC4APQ8TEL6 797 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 RNF145Q96MT1 663 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 HSD17B14Q9BPX1 270 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 FAM126AQ9BYI3 521 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 PEX1O43933 1283 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 PROCP04070 461 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 SERPINA4P29622 427 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 ATP5C1P36542 298 aaKnown RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 SGCGQ13326 291 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 ITGB3BPQ13352 177 aaPredicted RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 PABPC1LQ4VXU2 614 aaKnown RBP16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 PLEKHA7Q6IQ23 1121 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 ZNF544Q6NX49 715 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 PRELID2Q8N945 189 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 CDT1Q9H211 546 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 RAD21L1Q9H4I0 556 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 ACP6Q9NPH0 428 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 SPG21Q9NZD8 308 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 TSC22D4Q9Y3Q8 395 aa16.78■□□□□ 0.28
PCDHA1-203ENST00000504120 TRIM24O15164 1050 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 SNX3O60493 162 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 AMHP03971 560 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 HSMCR30P0CW71 290 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 TYMPP19971 482 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 PSMB9P28065 219 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 GPR15P49685 360 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 PSMD7P51665 324 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 NAA20P61599 178 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 PREPLQ4J6C6 727 aaPredicted RBP16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 BBS12Q6ZW61 710 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 PALB2Q86YC2 1186 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 NKAPQ8N5F7 415 aaKnown RBP16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 ANKRD52Q8NB46 1076 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 CERS2Q96G23 380 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 TINF2Q9BSI4 451 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 ROGDIQ9GZN7 287 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 MAN1C1Q9NR34 630 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 MORF4L1Q9UBU8 362 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 KLHL3Q9UH77 587 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 ZMYM5Q9UJ78 669 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 CRYL1Q9Y2S2 319 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 C15orf41Q9Y2V0 281 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 NFAT5O94916 1531 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 PQBP1O60828 265 aaKnown RBP16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 CABYRO75952 493 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 ABCB1P08183 1280 aaPredicted RBP16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 FGFR1P11362 822 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 ATP4AP20648 1035 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 GUCA1AP43080 201 aaPredicted RBP16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 PLK1P53350 603 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 CAPSQ13938 189 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 ANGPT1Q15389 498 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 C16orf46Q6P387 395 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 KIAA0319LQ8IZA0 1049 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 UBXN8O00124 270 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 ZNF862O60290 1169 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 XYLBO75191 536 aa16.77■□□□□ 0.28
PCDHA1-203ENST00000504120 NUDT17P0C025 328 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms