RNA–Protein interactions for RNA: ENST00000503974.5

PDLIM5-207, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 2,081 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-207ENST00000503974 RASSF5Q8WWW0 418 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 TOP1MTQ969P6 601 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 FAM149B1Q96BN6 582 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 TOE1Q96GM8 510 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 MKNK1Q9BUB5 465 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 MSTO1Q9BUK6 570 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 MRPS26Q9BYN8 205 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 HOXD1Q9GZZ0 328 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 KLHL25Q9H0H3 589 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 NXF3Q9H4D5 531 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 RAD21L1Q9H4I0 556 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 RC3H2Q9HBD1 1191 aaKnown RBP9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 CASS4Q9NQ75 786 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 SDHAF3Q9NRP4 125 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 RNF19AQ9NV58 838 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 ASNSD1Q9NWL6 643 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 KLHL14Q9P2G3 628 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 TNFRSF10DQ9UBN6 386 aa9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 FNDC1Q4ZHG4 1894 aaPredicted RBP9.81□□□□□ -0.84
PDLIM5-207ENST00000503974 PDE4DIPQ5VU43 2346 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 C17orf113A0A1B0GUU1 675 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 OR6C65A6NJZ3 312 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 F8W810 466 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 DDX3XO00571 662 aaKnown RBP eCLIP9.8□□□□□ -0.848e-10■■■□□ 15.6
PDLIM5-207ENST00000503974 TRDMT1O14717 391 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 CLIC2O15247 247 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 SHOXO15266 292 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 EXOC3O60645 756 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 GMNNO75496 209 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 AMHP03971 560 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 UQCRBP14927 111 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 NR2F2P24468 414 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 PTPN4P29074 926 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 GPD2P43304 727 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 SLC9A3P48764 834 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 C21orf59P57076 290 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 DEFB103AP81534 67 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 FKBP3Q00688 224 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 ASPHQ12797 758 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 XKR4Q5GH76 650 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 ZBTB41Q5SVQ8 909 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 PXDC1Q5TGL8 231 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 ZBTB33Q86T24 672 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 ZNF677Q86XU0 584 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 GALNT11Q8NCW6 608 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 DTX3LQ8TDB6 740 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 ADAMTS16Q8TE57 1224 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 DACT3Q96B18 629 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 HDAC11Q96DB2 347 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 SLC9A7Q96T83 725 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 SELENOSQ9BQE4 189 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 WACQ9BTA9 647 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 HEMGNQ9BXL5 484 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 PITHD1Q9GZP4 211 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 PAIP1Q9H074 479 aaKnown RBP9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 ISCUQ9H1K1 167 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 FGFR1OP2Q9NVK5 253 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 AIPL1Q9NZN9 384 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 CXXC1Q9P0U4 656 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 ATP6V1HQ9UI12 483 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 HES2Q9Y543 173 aa9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 HEMK1Q9Y5R4 338 aaPredicted RBP9.8□□□□□ -0.84
PDLIM5-207ENST00000503974 FAM172BPA6NC97 362 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 MEIS3P2A8K0S8 358 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 H3BSA7 217 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 CASQ2O14958 399 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 SLC16A3O15427 465 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 PI15O43692 258 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 DNAJC6O75061 913 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 FAM228BP0C875 321 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 STAG3L1P0CL83 205 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 TARSP26639 723 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 ECHS1P30084 290 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 BMPR1AP36894 532 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 TNFSF9P41273 254 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 EIF3BP55884 814 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 S100A12P80511 92 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 UBXN1Q04323 297 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 ATP1A4Q13733 1029 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 SEMA3AQ14563 771 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 RFTN1Q14699 578 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 CYP2A13Q16696 494 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 C9orf50Q5SZB4 431 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 ALKAL1Q6UXT8 129 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 RNF19BQ6ZMZ0 732 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 TAS2R42Q7RTR8 314 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 VSIG1Q86XK7 387 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 TMEM192Q8IY95 271 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 THNSL1Q8IYQ7 743 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 ZSWIM2Q8NEG5 633 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 PHOSPHO2Q8TCD6 241 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 DDI1Q8WTU0 396 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 HSPH1Q92598 858 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 ZNF641Q96N77 438 aaPredicted RBP9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 BTBD2Q9BX70 525 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 MTIF3Q9H2K0 278 aaKnown RBP9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 RNF39Q9H2S5 420 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 PCIF1Q9H4Z3 704 aa9.79□□□□□ -0.84
PDLIM5-207ENST00000503974 SNTG2Q9NY99 539 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 72.4 ms