RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 NPC1O15118 1278 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 RASA4O43374 803 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 PAPSS2O95340 614 aaPredicted RBP16.88■□□□□ 0.29
SCLT1-205ENST00000503401 KRT1P04264 644 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 SP9P0CG40 484 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 DGKEP52429 567 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 ZNF135P52742 658 aaPredicted RBP16.88■□□□□ 0.29
SCLT1-205ENST00000503401 ST8SIA6P61647 398 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 SULT2A1Q06520 285 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 ANO7Q6IWH7 933 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 LEKR1Q6ZMV7 388 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 LRRC57Q8N9N7 239 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 KRT35Q92764 455 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 ACE2Q9BYF1 805 aaPredicted RBP16.88■□□□□ 0.29
SCLT1-205ENST00000503401 KLC2Q9H0B6 622 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 SLC6A17Q9H1V8 727 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 MAGEH1Q9H213 219 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 LZTFL1Q9NQ48 299 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 SLC25A13Q9UJS0 675 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 FBXO4Q9UKT5 387 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 CAPN6Q9Y6Q1 641 aa16.88■□□□□ 0.29
SCLT1-205ENST00000503401 SHROOM3Q8TF72 1996 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 K7ERQ8 282 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 DCLK1O15075 740 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 PALMO75781 387 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 ZMPSTE24O75844 475 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 SRPRAP08240 638 aaKnown RBP16.87■□□□□ 0.29
SCLT1-205ENST00000503401 VAV1P15498 845 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 KDELR1P24390 212 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 ARF5P84085 180 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 PDK2Q15119 407 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 LRRC38Q5VT99 294 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 CACUL1Q86Y37 369 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 UMODL1-AS1Q8N2C9 162 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 MDGA1Q8NFP4 955 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 KIAA1524Q8TCG1 905 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 HMGB4Q8WW32 186 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 RNF25Q96BH1 459 aaPredicted RBP16.87■□□□□ 0.29
SCLT1-205ENST00000503401 SLC39A8Q9C0K1 460 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 LRRC19Q9H756 370 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 CD248Q9HCU0 757 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 PPP2R2CQ9Y2T4 447 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 HCN4Q9Y3Q4 1203 aa16.87■□□□□ 0.29
SCLT1-205ENST00000503401 C3orf70A6NLC5 250 aaPredicted RBP16.86■□□□□ 0.29
SCLT1-205ENST00000503401 SYNCRIPO60506 623 aaKnown RBP16.86■□□□□ 0.29
SCLT1-205ENST00000503401 APBB3O95704 486 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 FNTBP49356 437 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 STARD3Q14849 445 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 LLGL1Q15334 1064 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 ACCSLQ4AC99 568 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 ANKRD20A8PQ5CZ79 823 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 TMCO3Q6UWJ1 677 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 MAP7D3Q8IWC1 876 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 ARHGAP12Q8IWW6 846 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 ATP11CQ8NB49 1132 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 PCDH19Q8TAB3 1148 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 ZNF670Q9BS34 389 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 TPSD1Q9BZJ3 242 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 TSGA10Q9BZW7 698 aa16.86■□□□□ 0.29
SCLT1-205ENST00000503401 POLMQ9NP87 494 aaPredicted RBP16.86■□□□□ 0.29
SCLT1-205ENST00000503401 RCOR3Q9P2K3 495 aaPredicted RBP16.86■□□□□ 0.29
SCLT1-205ENST00000503401 DFFAO00273 331 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 SMAD6O43541 496 aaKnown RBP16.85■□□□□ 0.29
SCLT1-205ENST00000503401 PSTPIP1O43586 416 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 KRT86O43790 486 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 FTCDO95954 541 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 SRCP12931 536 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 ETFBP38117 255 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 NNMTP40261 264 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 YBEYP58557 167 aaPredicted RBP16.85■□□□□ 0.29
SCLT1-205ENST00000503401 E2F5Q15329 346 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 DLG2Q15700 870 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 IFI16Q16666 785 aaKnown RBP16.85■□□□□ 0.29
SCLT1-205ENST00000503401 PARP15Q460N3 678 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 ODF2Q5BJF6 829 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 ARHGAP36Q6ZRI8 547 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 SH2D3CQ8N5H7 860 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 CALR3Q96L12 384 aaKnown RBP16.85■□□□□ 0.29
SCLT1-205ENST00000503401 PRRX2Q99811 253 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 MKRN2Q9H000 416 aaKnown RBP16.85■□□□□ 0.29
SCLT1-205ENST00000503401 PRSS16Q9NQE7 514 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 BCCIPQ9P287 314 aaKnown RBP eCLIP16.85■□□□□ 0.29
SCLT1-205ENST00000503401 HPCAL4Q9UM19 191 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 PACSIN2Q9UNF0 486 aaPredicted RBP16.85■□□□□ 0.29
SCLT1-205ENST00000503401 FANCMQ8IYD8 2048 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 KDELR3O43731 214 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 BNIP3LO60238 219 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 SIN3BO75182 1162 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 MAP3K6O95382 1288 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 CD160O95971 181 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 GABRG2P18507 467 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 NDUFV2P19404 249 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 PAPOLAP51003 745 aaKnown RBP16.85■□□□□ 0.29
SCLT1-205ENST00000503401 NDST2P52849 883 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 SERINC3Q13530 473 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 HNRNPA1L2Q32P51 320 aaKnown RBP16.85■□□□□ 0.29
SCLT1-205ENST00000503401 AFMIDQ63HM1 303 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 RETSATQ6NUM9 610 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 MFSD7Q6UXD7 560 aa16.85■□□□□ 0.29
SCLT1-205ENST00000503401 NT5DC3Q86UY8 548 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms