RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 SLC25A13Q9UJS0 675 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 CLCA2Q9UQC9 943 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 SSUH2Q9Y2M2 353 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 UTP18Q9Y5J1 556 aaKnown RBP eCLIP6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 HS3ST3A1Q9Y663 406 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 TRPM6Q9BX84 2022 aa6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 COL27A1Q8IZC6 1860 aaPredicted RBP6.28□□□□□ -1.4
LSM3P4-201ENST00000502948 BPTFQ12830 3046 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 IGLV3-10A0A075B6K4 115 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 NEMP2A6NFY4 417 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 FAM47DPA6NHR8 397 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 DRGXA6NNA5 263 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 PLK4O00444 970 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 KCNK3O14649 394 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 WNT9AO14904 365 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 AP1G1O43747 822 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 DAB1O75553 588 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 F9P00740 461 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 PRNPP04156 253 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 CKMT1AP12532 417 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 CD44P16070 742 aaKnown RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 BMP6P22004 513 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 GNA15P30679 374 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 CDH5P33151 784 aaPredicted RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 MLLT3P42568 568 aaPredicted RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 GABRB2P47870 512 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 PSMD8P48556 350 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 CXCR3P49682 368 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 UCNP55089 124 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 ERVPABLB-1P60509 514 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 SLC20A2Q08357 652 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 CNTN1Q12860 1018 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 TARDBPQ13148 414 aaKnown RBP eCLIP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 PAK1Q13153 545 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 AUHQ13825 339 aaKnown RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 PIP5KL1Q5T9C9 394 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 HES3Q5TGS1 186 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 CDCP2Q5VXM1 449 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 FBXL22Q6P050 247 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 TRIM65Q6PJ69 517 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 OLFML1Q6UWY5 402 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 LAYNQ6UX15 382 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 LRRC69Q6ZNQ3 347 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 MMS22LQ6ZRQ5 1243 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 C11orf57Q6ZUT1 292 aaPredicted RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 BNIPLQ7Z465 357 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 ABI3BPQ7Z7G0 1075 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 GATAD2AQ86YP4 633 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 ARHGEF19Q8IW93 802 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 ZNF683Q8IZ20 524 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 WDTC1Q8N5D0 677 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 EID2Q8N6I1 236 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 DCAF4L2Q8NA75 395 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 SPRYD3Q8NCJ5 442 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 OR4C6Q8NH72 309 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 PIP4K2CQ8TBX8 421 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 GANCQ8TET4 914 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 HNRNPLLQ8WVV9 542 aaKnown RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 FGF11Q92914 225 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 KLHDC7BQ96G42 594 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 LRIG1Q96JA1 1093 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 PPP1R13BQ96KQ4 1090 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 RPL10LQ96L21 214 aaKnown RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 TBATAQ96M53 351 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 ZNF578Q96N58 590 aaPredicted RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 RPRD1AQ96P16 312 aaPredicted RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 BBC3Q96PG8 261 aaPredicted RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 C2orf49Q9BVC5 232 aaPredicted RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 DUSP23Q9BVJ7 150 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 HDAC8Q9BY41 377 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 CEP44Q9C0F1 390 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 INTS2Q9H0H0 1204 aaKnown RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 UBE2TQ9NPD8 197 aaPredicted RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 NLGN3Q9NZ94 848 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 NCKIPSDQ9NZQ3 722 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 APEX2Q9UBZ4 518 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 XPO7Q9UIA9 1087 aaKnown RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 MAN1B1Q9UKM7 699 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 SARDHQ9UL12 918 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 STAP1Q9ULZ2 295 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 FARP1Q9Y4F1 1045 aaPredicted RBP6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 CEP83Q9Y592 693 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 CSNK1G3Q9Y6M4 447 aa6.27□□□□□ -1.41
LSM3P4-201ENST00000502948 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 FAM149AA5PLN7 773 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 EIF4E1BA6NMX2 242 aaKnown RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 BECN2A8MW95 431 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 ERVH48-1M5A8F1 160 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 PIK3R2O00459 728 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 TOR1BO14657 336 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 TPP1O14773 563 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 THAP12O43422 761 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 TLX3O43711 291 aaPredicted RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 RTN2O75298 545 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 LETM1O95202 739 aaPredicted RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 MOCS2O96007 188 aaPredicted RBP6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 GIMD1P0DJR0 217 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 SRCP12931 536 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 PDGFRAP16234 1089 aa6.26□□□□□ -1.41
LSM3P4-201ENST00000502948 HNRNPA2B1P22626 353 aaKnown RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms