RNA–Protein interactions for RNA: ENST00000502802.1

HMGB1P3-201, Transcript of high mobility group box 1 pseudogene 3, humanhuman

BASIC

Gene HMGB1P3, Length 616 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P3-201ENST00000502802 ESRRBO95718 433 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 CSH1P0DML2 217 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 CSH2P0DML3 217 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 CD72P21854 359 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 DRD4P21917 467 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 CPOXP36551 454 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 MPLP40238 635 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 HADHAP40939 763 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 DGCR2P98153 550 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 TMEM115Q12893 351 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 LARS2Q15031 903 aaKnown RBP5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 DUSP28Q4G0W2 176 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 CDC73Q6P1J9 531 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 VSTM1Q6UX27 236 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 C17orf99Q6UX52 265 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 RTL10Q7L3V2 364 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 SLC29A4Q7RTT9 530 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 SZRD1Q7Z422 152 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 CPXM2Q8N436 756 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 C11orf65Q8NCR3 313 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 CXorf38Q8TB03 319 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 SCFD2Q8WU76 684 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 LINC00476Q8WZB0 136 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 CAVIN3Q969G5 261 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 DAZAP1Q96EP5 407 aaKnown RBP5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 MACROD1Q9BQ69 325 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 FTOQ9C0B1 505 aaKnown RBP eCLIP5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 NUAK2Q9H093 628 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 EHD2Q9NZN4 543 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 PCDHGB4Q9UN71 923 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 TMEM5Q9Y2B1 443 aa5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 REXO2Q9Y3B8 237 aaKnown RBP5.68□□□□□ -1.5
HMGB1P3-201ENST00000502802 SYNDIG1LA6NDD5 238 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 LIPT2A6NK58 231 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 LDLRAD4O15165 306 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 P4HA2O15460 535 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 STRNO43815 780 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 HLA-DQA2P01906 255 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 TUBB4AP04350 444 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 EIF2S1P05198 315 aaKnown RBP5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 GALTP07902 379 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 CDH2P19022 906 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 TYK2P29597 1187 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 ADRA1BP35368 520 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 PSMB10P40306 273 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 TAP1Q03518 808 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 SLC14A1Q13336 389 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 MED22Q15528 200 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 ANXA2RQ3ZCQ2 193 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 FBXO43Q4G163 708 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 ZKSCAN2Q63HK3 967 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 CYP20A1Q6UW02 462 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 KRT77Q7Z794 578 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 ULK2Q8IYT8 1036 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 GHDCQ8N2G8 530 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 SRBD1Q8N5C6 995 aaKnown RBP5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 SCAIQ8N9R8 606 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 ARHGEF2Q92974 986 aaKnown RBP5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 CALML4Q96GE6 196 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 ADAD1Q96M93 576 aaKnown RBP5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 C1QTNF3Q9BXJ4 246 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 CYP4F11Q9HBI6 524 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 TXNRD2Q9NNW7 524 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 ZNF70Q9UC06 446 aaPredicted RBP5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 SLCO3A1Q9UIG8 710 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 SNX8Q9Y5X2 465 aa5.67□□□□□ -1.5
HMGB1P3-201ENST00000502802 COL4A3Q01955 1670 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 OR6C68A6NDL8 312 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 PABPN1LA6NDY0 278 aaKnown RBP5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 TMEM247A6NEH6 219 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 BTBD19C9JJ37 291 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 TACC1O75410 805 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 GCATO75600 419 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 DNTTP04053 509 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 CYP2D6P10635 497 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 ZNF20P17024 532 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 FMO4P31512 558 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 ACSL1P33121 698 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 PPARGP37231 505 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 PTPN9P43378 593 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 CLK3P49761 638 aaKnown RBP5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 OLR1P78380 273 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 HOXA4Q00056 320 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 EPS8Q12929 822 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 BECN1Q14457 450 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 GSTA3Q16772 222 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 PFKFB3Q16875 520 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 FAM153CQ494X1 144 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 CEP85Q6P2H3 762 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 NCEH1Q6PIU2 408 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 DHRS13Q6UX07 377 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 RANBP10Q6VN20 620 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 TRIM72Q6ZMU5 477 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 NEK8Q86SG6 692 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 TADA2BQ86TJ2 420 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 RFX6Q8HWS3 928 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 RHPN2Q8IUC4 686 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 FAM9BQ8IZU0 186 aa5.66□□□□□ -1.5
HMGB1P3-201ENST00000502802 WDTC1Q8N5D0 677 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms