RNA–Protein interactions for RNA: ENST00000502563.5

UBE2D3-212, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 680 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-212ENST00000502563 CCDC33Q8N5R6 958 aa10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 ATOH1Q92858 354 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 HHIPQ96QV1 700 aa10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 KCTD15Q96SI1 283 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 PCED1AQ9H1Q7 454 aa10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 RSPH9Q9H1X1 276 aaPredicted RBP10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 OCEL1Q9H607 264 aa10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 NOL6Q9H6R4 1146 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 CWC15Q9P013 229 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 USP36Q9P275 1121 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 PCSK1NQ9UHG2 260 aa10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 TPX2Q9ULW0 747 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 HPCAL4Q9UM19 191 aa10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 REXO2Q9Y3B8 237 aaKnown RBP10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 SNX10Q9Y5X0 201 aa10.98□□□□□ -0.65
UBE2D3-212ENST00000502563 MYO15AQ9UKN7 3530 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 TCRBV21S2A2A0A5A6 115 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 ANTXRLA6NF34 631 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 MCF2LO15068 1137 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 DCLK1O15075 740 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 KDELR3O43731 214 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 CREB3O43889 395 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 EPHX1P07099 455 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 ERCC2P18074 760 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 NDUFV2P19404 249 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 IL4RP24394 825 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 DPP6P42658 865 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 SERPINH1P50454 418 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 ARF5P84085 180 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 SERINC3Q13530 473 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 RFTN1Q14699 578 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 POLD3Q15054 466 aaPredicted RBP10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 IFI16Q16666 785 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 CA9Q16790 459 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 FNDC3BQ53EP0 1204 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 C9orf64Q5T6V5 341 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 KIAA1211LQ6NV74 962 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 USP30Q70CQ3 517 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 KBTBD6Q86V97 674 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 SPNS2Q8IVW8 549 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 LRRC8AQ8IWT6 810 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 RHOT1Q8IXI2 618 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 RNF10Q8N5U6 811 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 PCDH20Q8N6Y1 951 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 SORCS1Q8WY21 1168 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 PTPRN2Q92932 1015 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 FATE1Q969F0 183 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 LRIG1Q96JA1 1093 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 PDLIM2Q96JY6 352 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 BTBD6Q96KE9 485 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 SPACA7Q96KW9 195 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 CCDC114Q96M63 670 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 CSPG4P5Q96PW8 444 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 TSGA10Q9BZW7 698 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 MKRN2Q9H000 416 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 KLC2Q9H0B6 622 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 PCDH18Q9HCL0 1135 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 ATP13A1Q9HD20 1204 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 PRSS16Q9NQE7 514 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 ITM2CQ9NQX7 267 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 NDFIP2Q9NV92 336 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 DDX56Q9NY93 547 aaKnown RBP10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 RAD54BQ9Y620 910 aa10.97□□□□□ -0.65
UBE2D3-212ENST00000502563 ARHGAP42A6NI28 874 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 C10orf142B7Z368 130 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 WASH3PC4AMC7 463 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 LRP3O75074 770 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 RPP40O75818 363 aaKnown RBP10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 CD160O95971 181 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 ADH1BP00325 375 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 SRCP12931 536 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 TCF4P15884 667 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 GOT1P17174 413 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 OXTRP30559 389 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 HOXD12P35452 270 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 PLA2G5P39877 138 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 FNTBP49356 437 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 ZNF33AQ06730 810 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 KIF5AQ12840 1032 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 DPYSL3Q14195 570 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 MESDQ14696 234 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 TAZQ16635 292 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 MAP7D1Q3KQU3 841 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 KCNT1Q5JUK3 1230 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 ZNF776Q68DI1 518 aaPredicted RBP10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 TXNRD3NBQ6F5E7 133 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 ANO7Q6IWH7 933 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 TSSK4Q6SA08 328 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 SLC36A4Q6YBV0 504 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 DSG4Q86SJ6 1040 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 TMPRSS6Q8IU80 811 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 SUMF1Q8NBK3 374 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 SPC24Q8NBT2 197 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 TPCN2Q8NHX9 752 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 CYB5D2Q8WUJ1 264 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 PRCCQ92733 491 aaPredicted RBP10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 SIPA1Q96FS4 1042 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 ZNF599Q96NL3 588 aa10.96□□□□□ -0.65
UBE2D3-212ENST00000502563 TMEM121BQ9BXQ6 578 aaPredicted RBP10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms