RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 FSTL4Q6MZW2 842 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 LINGO4Q6UY18 593 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 ZNF852Q6ZMS4 543 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 ADIPOR2Q86V24 386 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 RASGEF1CQ8N431 466 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 TTC13Q8NBP0 860 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 CCNYQ8ND76 341 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 CYB5D2Q8WUJ1 264 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 MAIP1Q8WWC4 291 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 SORCS1Q8WY21 1168 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 LMLNQ96KR4 655 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 OLFM3Q96PB7 478 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 NAP1L3Q99457 506 aaPredicted RBP13.87□□□□□ -0.19
CPNE1-227ENST00000498056 AP1M1Q9BXS5 423 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 ZDHHC4Q9NPG8 344 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 WNT16Q9UBV4 365 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 R3HDM2Q9Y2K5 976 aaKnown RBP13.87□□□□□ -0.19
CPNE1-227ENST00000498056 OR51B4Q9Y5P0 310 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 RAD54BQ9Y620 910 aa13.87□□□□□ -0.19
CPNE1-227ENST00000498056 VCANP13611 3396 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 GOLGA6L10A0A0M3HER8 536 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 PRRT4C9JH25 899 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 H7C0C1 242 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 DCXO43602 365 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 PRLRP16471 622 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 DRD1P21728 446 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 PAFAH1B1P43034 410 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 ATP5OP48047 213 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 NR2C2P49116 596 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 EIF3EP60228 445 aaKnown RBP13.86□□□□□ -0.19
CPNE1-227ENST00000498056 ARF5P84085 180 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 ZXDAP98168 799 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 FNDC3BQ53EP0 1204 aaKnown RBP13.86□□□□□ -0.19
CPNE1-227ENST00000498056 TMEM196Q5HYL7 178 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 TMEM215Q68D42 235 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 B4GALNT4Q76KP1 1039 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 BZW1Q7L1Q6 419 aaKnown RBP13.86□□□□□ -0.19
CPNE1-227ENST00000498056 CDKL3Q8IVW4 592 aaPredicted RBP13.86□□□□□ -0.19
CPNE1-227ENST00000498056 ACTRT1Q8TDG2 376 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 UCMAQ8WVF2 138 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 HDAC11Q96DB2 347 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 ALG14Q96F25 216 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 SHDQ96IW2 340 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 RPL10LQ96L21 214 aaKnown RBP13.86□□□□□ -0.19
CPNE1-227ENST00000498056 QKIQ96PU8 341 aaKnown RBP eCLIP13.86□□□□□ -0.19
CPNE1-227ENST00000498056 LGMNQ99538 433 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 ACE2Q9BYF1 805 aaPredicted RBP13.86□□□□□ -0.19
CPNE1-227ENST00000498056 FOXQ1Q9C009 403 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 MFSD1Q9H3U5 465 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 TBC1D17Q9HA65 648 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 FBRSL1Q9HCM7 1045 aaKnown RBP13.86□□□□□ -0.19
CPNE1-227ENST00000498056 SEPT10Q9P0V9 454 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 IPO11Q9UI26 975 aaKnown RBP13.86□□□□□ -0.19
CPNE1-227ENST00000498056 MRPS17Q9Y2R5 130 aaKnown RBP13.86□□□□□ -0.19
CPNE1-227ENST00000498056 ACTL7AQ9Y615 435 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 MYLKQ15746 1914 aa13.86□□□□□ -0.19
CPNE1-227ENST00000498056 KMT2EQ8IZD2 1858 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 J3KR12 359 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 STK25O00506 426 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 KRIT1O00522 736 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 NCAM2O15394 837 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 KDELR3O43731 214 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 PRAMEF11O60813 436 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 NEBLO76041 1014 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 ASLP04424 464 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 ATP5BP06576 529 aaKnown RBP13.85□□□□□ -0.19
CPNE1-227ENST00000498056 TARSP26639 723 aaKnown RBP13.85□□□□□ -0.19
CPNE1-227ENST00000498056 PLK1P53350 603 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 ECT2LQ008S8 904 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 SULT2A1Q06520 285 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 PPIDQ08752 370 aaKnown RBP13.85□□□□□ -0.19
CPNE1-227ENST00000498056 SNX1Q13596 522 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 EGFLAMQ63HQ2 1017 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 TIGD7Q6NT04 549 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-227ENST00000498056 RETSATQ6NUM9 610 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 KIAA0907Q7Z7F0 614 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-227ENST00000498056 CCDC13Q8IYE1 715 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 ZNF513Q8N8E2 541 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-227ENST00000498056 USP33Q8TEY7 942 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 NSMCE1Q8WV22 266 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 TFB1MQ8WVM0 346 aaKnown RBP13.85□□□□□ -0.19
CPNE1-227ENST00000498056 C1orf54Q8WWF1 131 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 EZH1Q92800 747 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-227ENST00000498056 ACDQ96AP0 544 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 CCDC114Q96M63 670 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 PDFQ9HBH1 243 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 LTB4R2Q9NPC1 389 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 RBM12Q9NTZ6 932 aaKnown RBP13.85□□□□□ -0.19
CPNE1-227ENST00000498056 ELOVL2Q9NXB9 296 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 UBA2Q9UBT2 640 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-227ENST00000498056 TTC7AQ9ULT0 858 aaPredicted RBP13.85□□□□□ -0.19
CPNE1-227ENST00000498056 TTLL3Q9Y4R7 772 aa13.85□□□□□ -0.19
CPNE1-227ENST00000498056 TRIOO75962 3097 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 KANSL1LA0AUZ9 987 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 ZSCAN5CA6NGD5 496 aaPredicted RBP13.84□□□□□ -0.19
CPNE1-227ENST00000498056 SHISA7A6NL88 538 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 LIASO43766 372 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 MAFKO60675 156 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 RNF40O75150 1001 aa13.84□□□□□ -0.19
CPNE1-227ENST00000498056 DLDP09622 509 aaKnown RBP13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms