RNA–Protein interactions for RNA: ENST00000497638.2

VPS45-210, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,135 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-210ENST00000497638 INAVAQ3KP66 663 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 TAF1BQ53T94 588 aaPredicted RBP8.04□□□□□ -1.12
VPS45-210ENST00000497638 KRT79Q5XKE5 535 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 EGFLAMQ63HQ2 1017 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 PCSK4Q6UW60 755 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 DHRS13Q6UX07 377 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 VSTM1Q6UX27 236 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 UNC5AQ6ZN44 842 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 C4orf50Q6ZRC1 276 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 NT5DC4Q86YG4 428 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 SCN4BQ8IWT1 228 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 CHPFQ8IZ52 775 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 PDCL2Q8N4E4 241 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 IGSF22Q8N9C0 903 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 SPATA17Q96L03 361 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 MRGPRX1Q96LB2 322 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 GABRG3Q99928 467 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 TTLL2Q9BWV7 592 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 SMPD4Q9NXE4 827 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 DDX43Q9NXZ2 648 aaKnown RBP8.04□□□□□ -1.12
VPS45-210ENST00000497638 KCND2Q9NZV8 630 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.04□□□□□ -1.12
VPS45-210ENST00000497638 BTBD3Q9Y2F9 522 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 ZNF451Q9Y4E5 1061 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 PCDHB6Q9Y5E3 794 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 PCDHGA1Q9Y5H4 931 aa8.04□□□□□ -1.12
VPS45-210ENST00000497638 ZC3H12DA2A288 527 aaKnown RBP8.03□□□□□ -1.12
VPS45-210ENST00000497638 ZNF840PA6NDX5 716 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 SCAMP3O14828 347 aaKnown RBP8.03□□□□□ -1.12
VPS45-210ENST00000497638 HUS1O60921 280 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 OAS1P00973 400 aaKnown RBP8.03□□□□□ -1.12
VPS45-210ENST00000497638 NCAM1P13591 858 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 TACR1P25103 407 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 BNC1Q01954 994 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 RHDQ02161 417 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 SEMG2Q02383 582 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 RTP5Q14D33 572 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 TCEAL1Q15170 157 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 ZNF174Q15697 407 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 ZNF394Q53GI3 561 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 CCDC157Q569K6 752 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 GRAMD4Q6IC98 578 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 KIAA1324Q6UXG2 1013 aaKnown RBP8.03□□□□□ -1.12
VPS45-210ENST00000497638 DENND5BQ6ZUT9 1274 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 MIB1Q86YT6 1006 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 TP53I13Q8NBR0 393 aaPredicted RBP8.03□□□□□ -1.12
VPS45-210ENST00000497638 TOE1Q96GM8 510 aaKnown RBP8.03□□□□□ -1.12
VPS45-210ENST00000497638 PTCHD1Q96NR3 888 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 HNRNPABQ99729 332 aaKnown RBP8.03□□□□□ -1.12
VPS45-210ENST00000497638 GPR174Q9BXC1 333 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 RNF38Q9H0F5 515 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 PCED1AQ9H1Q7 454 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 CD93Q9NPY3 652 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 IGSF5Q9NSI5 407 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 WSB2Q9NYS7 404 aaPredicted RBP8.03□□□□□ -1.12
VPS45-210ENST00000497638 USP36Q9P275 1121 aaKnown RBP8.03□□□□□ -1.12
VPS45-210ENST00000497638 FTSJ1Q9UET6 329 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 GTF3C4Q9UKN8 822 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 PPT2Q9UMR5 302 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 L1RE1Q9UN81 338 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 PCDHGB7Q9Y5F8 929 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 SPTAN1Q13813 2472 aaKnown RBP8.03□□□□□ -1.12
VPS45-210ENST00000497638 AHCTF1Q8WYP5 2266 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 DOPEY2Q9Y3R5 2298 aa8.03□□□□□ -1.12
VPS45-210ENST00000497638 FFAR3O14843 346 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 PCDHGA12O60330 932 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 DTNBO60941 627 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 IL18RAPO95256 599 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 NTRK1P04629 796 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 MBL2P11226 248 aaPredicted RBP8.02□□□□□ -1.13
VPS45-210ENST00000497638 JUPP14923 745 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 IFNGR1P15260 489 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 ACAT1P24752 427 aaKnown RBP8.02□□□□□ -1.13
VPS45-210ENST00000497638 ANXA13P27216 316 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 OXTRP30559 389 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 L1CAMP32004 1257 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 ABCD1P33897 745 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 IL12RB1P42701 662 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 TRAPPC10P48553 1259 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 LHX1P48742 406 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 CCT8P50990 548 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 NOP14P78316 857 aaKnown RBP8.02□□□□□ -1.13
VPS45-210ENST00000497638 TLE3Q04726 772 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 STARD3Q14849 445 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 MAPRE1Q15691 268 aaKnown RBP8.02□□□□□ -1.13
VPS45-210ENST00000497638 TTC38Q5R3I4 469 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 DCAF12L1Q5VU92 463 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 KCNK18Q7Z418 384 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 LSRQ86X29 649 aaPredicted RBP8.02□□□□□ -1.13
VPS45-210ENST00000497638 LRRC52Q8N7C0 313 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 SCFD1Q8WVM8 642 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 FGF11Q92914 225 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 RNF34Q969K3 372 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 SLITRK1Q96PX8 696 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 ACOX2Q99424 681 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 SPHK2Q9NRA0 654 aa8.02□□□□□ -1.13
VPS45-210ENST00000497638 MAGEC2Q9UBF1 373 aaPredicted RBP8.02□□□□□ -1.13
VPS45-210ENST00000497638 COL5A1P20908 1838 aaPredicted RBP8.01□□□□□ -1.13
VPS45-210ENST00000497638 COL12A1Q99715 3063 aa8.01□□□□□ -1.13
VPS45-210ENST00000497638 A0A1B0GVT2 93 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms