RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 RBPMS2Q6ZRY4 209 aaKnown RBP6.35□□□□□ -1.39
BRCA1-224ENST00000497488 LARP4Q71RC2 724 aaKnown RBP eCLIP6.35□□□□□ -1.39
BRCA1-224ENST00000497488 GPRIN1Q7Z2K8 1008 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 SLC46A3Q7Z3Q1 461 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 FAM185AQ8N0U4 392 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 SIX6OS1Q8N1H7 587 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 CFAP52Q8N1V2 620 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 XXYLT1Q8NBI6 393 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 TMEM171Q8WVE6 324 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 OVCA2Q8WZ82 227 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 NPIPB3Q92617 1050 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 LPPQ93052 612 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 CHFRQ96EP1 664 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 FAR2Q96K12 515 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 CLIC6Q96NY7 704 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 WRNIP1Q96S55 665 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 NPAS1Q99742 590 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 SMOQ99835 787 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 SYT3Q9BQG1 590 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 CCDC106Q9BWC9 280 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 TLR10Q9BXR5 811 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 PCED1AQ9H1Q7 454 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 TASP1Q9H6P5 420 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 RRP7BPQ9NSQ0 103 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 CHCHD3Q9NX63 227 aaKnown RBP6.35□□□□□ -1.39
BRCA1-224ENST00000497488 ACTR3BQ9P1U1 418 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 HSPB7Q9UBY9 170 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 INTS6Q9UL03 887 aaKnown RBP6.35□□□□□ -1.39
BRCA1-224ENST00000497488 SLC12A4Q9UP95 1085 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 TRIM17Q9Y577 477 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 AP1M2Q9Y6Q5 423 aa6.35□□□□□ -1.39
BRCA1-224ENST00000497488 RGSL1A5PLK6 1076 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 PAPSS1O43252 624 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 WDR47O94967 919 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 HEXBP07686 556 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 CYP3A4P08684 503 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 LYL1P12980 280 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 TRHRP34981 398 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 NT5C2P49902 561 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 MEOX1P50221 254 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 MVDP53602 400 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 BPIFB4P59827 614 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 ERVFC1P60507 584 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 TUBB4BP68371 445 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 HTD2P86397 168 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 PIGFQ07326 219 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 MRPL49Q13405 166 aaKnown RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 TUBB3Q13509 450 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 CAPSQ13938 189 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 RCN2Q14257 317 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 FRG1Q14331 258 aaKnown RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 SF3B3Q15393 1217 aaKnown RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 C15orf59Q2T9L4 293 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 ASTE1Q2TB18 679 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 TOR1AIP1Q5JTV8 583 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 SH2D4BQ5SQS7 431 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 ANKS6Q68DC2 871 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 JADE1Q6IE81 842 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 WDR93Q6P2C0 686 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 ZC3H14Q6PJT7 736 aaKnown RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 CCDC73Q6ZRK6 1079 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 MSANTD1Q6ZTZ1 278 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 RABEPKQ7Z6M1 372 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 ZER1Q7Z7L7 766 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 PEX5LQ8IYB4 626 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 SYCP3Q8IZU3 236 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 LILRA2Q8N149 483 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 ANKRD35Q8N283 1001 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 FBXO30Q8TB52 745 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 CLEC4CQ8WTT0 213 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 RAB40AQ8WXH6 277 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 CNOT9Q92600 299 aaKnown RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 CORO2AQ92828 525 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 SYAP1Q96A49 352 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 HAPLN3Q96S86 360 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 SRSF8Q9BRL6 282 aaKnown RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 SLC25A23Q9BV35 468 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 MLPHQ9BV36 600 aaPredicted RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 PTDSS2Q9BVG9 487 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 TAS2R3Q9NYW6 316 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 LRIT1Q9P2V4 623 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 AMACRQ9UHK6 382 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 NDRG4Q9ULP0 352 aaKnown RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 SNX14Q9Y5W7 946 aa6.34□□□□□ -1.39
BRCA1-224ENST00000497488 EPRSP07814 1512 aaKnown RBP6.34□□□□□ -1.39
BRCA1-224ENST00000497488 ARHGAP35Q9NRY4 1499 aa6.34□□□□□ -1.4
BRCA1-224ENST00000497488 RAPGEF6Q8TEU7 1601 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 B5MCH6 92 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 K7EPI3 171 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 RTN2O75298 545 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 BCAS2O75934 225 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-224ENST00000497488 CSF1RP07333 972 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 HMOX1P09601 288 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 KRT13P13646 458 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 ARSAP15289 507 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 ERCC2P18074 760 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 KRT4P19013 534 aa6.33□□□□□ -1.4
BRCA1-224ENST00000497488 CASTP20810 708 aaKnown RBP6.33□□□□□ -1.4
BRCA1-224ENST00000497488 SP100P23497 879 aaPredicted RBP6.33□□□□□ -1.4
BRCA1-224ENST00000497488 TNFRSF8P28908 595 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms