RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 ZBTB34Q8NCN2 500 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 RNF169Q8NCN4 708 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 EXD1Q8NHP7 514 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 METTL21AQ8WXB1 218 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 RAB7BQ96AH8 199 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 HAUS1Q96CS2 278 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ADAD1Q96M93 576 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 DACH2Q96NX9 599 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 OLFM3Q96PB7 478 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 TAAR9Q96RI9 348 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 CDK5RAP1Q96SZ6 601 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 IFIH1Q9BYX4 1025 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 FAM192AQ9GZU8 254 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 MIS12Q9H081 205 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF287Q9HBT7 754 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 TCF7L1Q9HCS4 588 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 INTS7Q9NVH2 962 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 PAG1Q9NWQ8 432 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 GDAP2Q9NXN4 497 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 DBF4Q9UBU7 674 aaPredicted RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ADD3Q9UEY8 706 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 KCNN3Q9UGI6 736 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 VPS51Q9UID3 782 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 DENND2AQ9ULE3 1009 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 PCDHGB4Q9UN71 923 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 INVSQ9Y283 1065 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 PTPN22Q9Y2R2 807 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 NUMBLQ9Y6R0 609 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 COMMD3-BMI1R4GMX3 469 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 NHSL1Q5SYE7 1610 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF644Q9H582 1327 aaPredicted RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 A0A087WV62 115 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 TRBV23-1A0A0A0MS06 115 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 TRAV20A0A0B4J274 112 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 CCDC151A5D8V7 595 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 A8MX80 341 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 H3BUI4 141 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 BTN3A1O00481 513 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 IFIT3O14879 490 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 PLD2O14939 933 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 HGSO14964 777 aaPredicted RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 NPC1O15118 1278 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 IFNB1P01574 187 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 GSTA2P09210 222 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 HMOX1P09601 288 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 MED14OSP0DP75 135 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 LAG3P18627 525 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 CCNA2P20248 432 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 PSMA2P25787 234 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 HLA-FP30511 346 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC1A1P43005 524 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 GLRBP48167 497 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 KCNJ5P48544 419 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ADARP55265 1226 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 HTD2P86397 168 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 PPP2R2BQ00005 443 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 TAP1Q03518 808 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 KRT17Q04695 432 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ZNF33BQ06732 778 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 FZD5Q13467 585 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 HABP2Q14520 560 aaPredicted RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 SLC39A14Q15043 492 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 LONRF2Q1L5Z9 754 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 PRR16Q569H4 304 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 KIAA1841Q6NSI8 718 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 RPUSD3Q6P087 351 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 LBX2Q6XYB7 198 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ETV3LQ6ZN32 361 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 LONP2Q86WA8 852 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 AMIGO3Q86WK7 504 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 LRRC6Q86X45 466 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 RHPN2Q8IUC4 686 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 DENND6AQ8IWF6 608 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ANKRD13CQ8N6S4 541 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 DDHD1Q8NEL9 900 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 TTLL11Q8NHH1 800 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 CLHC1Q8NHS4 586 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 PCDH19Q8TAB3 1148 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 POC1BQ8TC44 478 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 RFKQ969G6 155 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ABTB1Q969K4 478 aaPredicted RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 GRAMD1AQ96CP6 724 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 LRRC39Q96DD0 335 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 CCDC120Q96HB5 630 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 CNOT6LQ96LI5 555 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 LENG8Q96PV6 779 aaPredicted RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 MMP19Q99542 508 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 CDK19Q9BWU1 502 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 CRNKL1Q9BZJ0 848 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 TRIM15Q9C019 465 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ABCG8Q9H221 673 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ACTR5Q9H9F9 607 aaPredicted RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 SARS2Q9NP81 518 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 DDX4Q9NQI0 724 aaKnown RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 H2AFY2Q9P0M6 372 aaPredicted RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ACTR3BQ9P1U1 418 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 KLHL9Q9P2J3 617 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 ORC3Q9UBD5 711 aaPredicted RBP3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 IL19Q9UHD0 177 aa3.19□□□□□ -1.9
SNRNP48-202ENST00000496946 RPS6KA6Q9UK32 745 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms