RNA–Protein interactions for RNA: ENST00000496738.5

LMNA-216, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-216ENST00000496738 UHMK1Q8TAS1 419 aaKnown RBP17.26■□□□□ 0.35
LMNA-216ENST00000496738 PPP2R3CQ969Q6 453 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 PABPC5Q96DU9 382 aaKnown RBP17.26■□□□□ 0.35
LMNA-216ENST00000496738 RBM15Q96T37 977 aaKnown RBP eCLIP17.26■□□□□ 0.353e-6■■■■□ 20.8
LMNA-216ENST00000496738 NSUN3Q9H649 340 aaKnown RBP17.26■□□□□ 0.35
LMNA-216ENST00000496738 SP110Q9HB58 689 aa17.26■□□□□ 0.35
LMNA-216ENST00000496738 C2orf16Q68DN1 1984 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.25■□□□□ 0.35
LMNA-216ENST00000496738 A0A1B0GVM2 712 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 TCAF2A6NFQ2 919 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 ZNF197O14709 1029 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 LATS1O95835 1130 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 NFKB1P19838 968 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 ZNF177Q13360 481 aaPredicted RBP17.25■□□□□ 0.35
LMNA-216ENST00000496738 C11orf91Q3C1V1 193 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 FNBP1LQ5T0N5 605 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 MREGQ8N565 214 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 TDRD5Q8NAT2 981 aaKnown RBP17.25■□□□□ 0.35
LMNA-216ENST00000496738 ZSCAN18Q8TBC5 510 aaPredicted RBP17.25■□□□□ 0.35
LMNA-216ENST00000496738 TMA16Q96EY4 203 aaKnown RBP17.25■□□□□ 0.35
LMNA-216ENST00000496738 TSGA13Q96PP4 275 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 CDCA3Q99618 268 aaPredicted RBP17.25■□□□□ 0.35
LMNA-216ENST00000496738 SPON2Q9BUD6 331 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 SAYSD1Q9NPB0 183 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 MATN3O15232 486 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 AVILO75366 819 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 CLDN11O75508 207 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 RHOCP08134 193 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 PFKLP17858 780 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 CD68P34810 354 aaPredicted RBP17.25■□□□□ 0.35
LMNA-216ENST00000496738 LMAN1P49257 510 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 FASTKD3Q14CZ7 662 aaKnown RBP17.25■□□□□ 0.35
LMNA-216ENST00000496738 TEX44Q53QW1 395 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 HOOK3Q86VS8 718 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 ARID3BQ8IVW6 561 aaPredicted RBP17.25■□□□□ 0.35
LMNA-216ENST00000496738 CNTD1Q8N815 330 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 PDCD7Q8N8D1 485 aaKnown RBP17.25■□□□□ 0.35
LMNA-216ENST00000496738 DDI1Q8WTU0 396 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 CDC42EP4Q9H3Q1 356 aaKnown RBP17.25■□□□□ 0.35
LMNA-216ENST00000496738 ACTL7AQ9Y615 435 aa17.25■□□□□ 0.35
LMNA-216ENST00000496738 H0Y626 953 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 CHADO15335 359 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 MTSS1O43312 755 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 GLDCP23378 1020 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 CALRP27797 417 aaKnown RBP17.24■□□□□ 0.35
LMNA-216ENST00000496738 ETFBP38117 255 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 GNA12Q03113 381 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 OLIG2Q13516 323 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 SPARCL1Q14515 664 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 ZSCAN26Q16670 478 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 PARP15Q460N3 678 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 MSS51Q4VC12 460 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 FSCBQ5H9T9 825 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 IL31Q6EBC2 164 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 TIGD7Q6NT04 549 aaPredicted RBP17.24■□□□□ 0.35
LMNA-216ENST00000496738 OTOP3Q7RTS5 596 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 HJURPQ8NCD3 748 aaPredicted RBP17.24■□□□□ 0.35
LMNA-216ENST00000496738 OR2W6PQ8NHA6 318 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 ARHGEF2Q92974 986 aaKnown RBP17.24■□□□□ 0.35
LMNA-216ENST00000496738 C9orf72Q96LT7 481 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 GORASP1Q9BQQ3 440 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 PRO3102Q9H379 93 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 UBP1Q9NZI7 540 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 RRP15Q9Y3B9 282 aaKnown RBP17.24■□□□□ 0.35
LMNA-216ENST00000496738 REV3LO60673 3130 aa17.24■□□□□ 0.35
LMNA-216ENST00000496738 POU2F2P09086 479 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 GRIA1P42261 906 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 PDIA2Q13087 525 aaKnown RBP17.23■□□□□ 0.35
LMNA-216ENST00000496738 SERINC3Q13530 473 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 SLMAPQ14BN4 828 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 HIF1AQ16665 826 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 C6orf118Q5T5N4 469 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 CFAP58Q5T655 872 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 RNF219Q5W0B1 726 aaPredicted RBP17.23■□□□□ 0.35
LMNA-216ENST00000496738 GET4Q7L5D6 327 aaPredicted RBP17.23■□□□□ 0.35
LMNA-216ENST00000496738 ANKMY2Q8IV38 441 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 WFDC5Q8TCV5 224 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 DZANK1Q9NVP4 752 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 PIH1D1Q9NWS0 290 aaKnown RBP17.23■□□□□ 0.35
LMNA-216ENST00000496738 PLAAQ9Y263 795 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 TYW5A2RUC4 315 aaKnown RBP17.23■□□□□ 0.35
LMNA-216ENST00000496738 NEBLO76041 1014 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 ACSL3O95573 720 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 PEX11BO96011 259 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 HLA-DQB2P05538 268 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 SLC10A7Q0GE19 358 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 SEMA5AQ13591 1074 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 CXorf57Q6NSI4 855 aaKnown RBP17.23■□□□□ 0.35
LMNA-216ENST00000496738 C4orf22Q6V702 233 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 CAPN12Q6ZSI9 719 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 CHST9Q7L1S5 443 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 FAM217AQ8IXS0 508 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 ZBED8Q8IZ13 594 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 OTUD6BQ8N6M0 293 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 TEKT5Q96M29 485 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 ZIM3Q96PE6 472 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 MUC3BQ9H195 1237 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 EPB41L4BQ9H329 900 aa17.23■□□□□ 0.35
LMNA-216ENST00000496738 RBM22Q9NW64 420 aaKnown RBP eCLIP17.23■□□□□ 0.35
LMNA-216ENST00000496738 MYO9BQ13459 2157 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms