RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 MYCLP1P12525 358 aaPredicted RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 ATF7P17544 494 aaPredicted RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 PTPN1P18031 435 aaKnown RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 HOXD10P28358 340 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 RFC1P35251 1148 aaPredicted RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 RPL22P35268 128 aaKnown RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 STAT3P40763 770 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 LEPRP48357 1165 aaKnown RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 GNG2P59768 71 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 EIF3EP60228 445 aaKnown RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 MRPS9P82933 396 aaKnown RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 C19orf57Q0VDD7 668 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 HSPA14Q0VDF9 509 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 CEACAM7Q14002 265 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 SELPLGQ14242 412 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 MAPRE1Q15691 268 aaKnown RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 UBE2SQ16763 222 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 GPAT2Q6NUI2 795 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 MFSD7Q6UXD7 560 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 KCTD1Q719H9 257 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 GET4Q7L5D6 327 aaPredicted RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 MAVSQ7Z434 540 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 ZC3H7AQ8IWR0 971 aaKnown RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 CTAGE3PQ8IX95 158 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 FAM20CQ8IXL6 584 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 EFCAB3Q8N7B9 438 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 CNTD1Q8N815 330 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 PPM1NQ8N819 430 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 TTC9Q92623 222 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 TRIM63Q969Q1 353 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 FAR2Q96K12 515 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 KLHL32Q96NJ5 620 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 BCL7BQ9BQE9 202 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 RPAP3Q9H6T3 665 aaPredicted RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 DCDC2Q9UHG0 476 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 GREB1LQ9C091 1923 aaPredicted RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 HTTP42858 3142 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 ARHGEF35A5YM69 484 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 MEIS1O00470 390 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 CXCL11O14625 94 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 AIM2O14862 343 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 DNAJB5O75953 348 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 TMEM63AO94886 807 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 FKBP9O95302 570 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 NDUFB10O96000 172 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 GSRP00390 522 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 KRT10P13645 584 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 PIK3R1P27986 724 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 GCLMP48507 274 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 SNAP25P60880 206 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 ABCE1P61221 599 aaKnown RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 GCNT1Q02742 428 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 ENPEPQ07075 957 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 C1orf220Q5T0J3 134 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 ABRAXAS1Q6UWZ7 409 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 CCDC81Q6ZN84 652 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 CYS1Q717R9 158 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 CCDC60Q8IWA6 550 aaPredicted RBP9.23□□□□□ -0.93
HPS4-217ENST00000496385 ABHD11Q8NFV4 315 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 FEZF2Q8TBJ5 459 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 HCAR2Q8TDS4 363 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 RSAD2Q8WXG1 361 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 C17orf80Q9BSJ5 609 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 HERC2P3Q9BVR0 1158 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 AKIP1Q9NQ31 210 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 TMX2Q9Y320 296 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 TCAF1Q9Y4C2 921 aa9.23□□□□□ -0.93
HPS4-217ENST00000496385 BRCA2P51587 3418 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 ISPDA4D126 451 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 UNCXA6NJT0 531 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 EVPLLA8MZ36 301 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 VWA5AO00534 786 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 CHADO15335 359 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 PAPSS1O43252 624 aaPredicted RBP9.22□□□□□ -0.93
HPS4-217ENST00000496385 SEC14L2O76054 403 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 SERPINB1P30740 379 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 HLCSP50747 726 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 AP3M2P53677 418 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 C1QBPQ07021 282 aaKnown RBP9.22□□□□□ -0.93
HPS4-217ENST00000496385 SREBF2Q12772 1141 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 MAMLD1Q13495 774 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 TRIM25Q14258 630 aaKnown RBP9.22□□□□□ -0.93
HPS4-217ENST00000496385 TAF1CQ15572 869 aaPredicted RBP9.22□□□□□ -0.93
HPS4-217ENST00000496385 AASDHQ4L235 1098 aaPredicted RBP9.22□□□□□ -0.93
HPS4-217ENST00000496385 BOLA3Q53S33 107 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 RFPL4BQ6ZWI9 263 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 TFAP2DQ7Z6R9 452 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 PHF13Q86YI8 300 aaPredicted RBP9.22□□□□□ -0.93
HPS4-217ENST00000496385 XXYLT1Q8NBI6 393 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 CAPSLQ8WWF8 208 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 TCF12Q99081 682 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 SORT1Q99523 831 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 SHCBP1LQ9BZQ2 653 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 TRPV6Q9H1D0 765 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 TP63Q9H3D4 680 aaPredicted RBP9.22□□□□□ -0.93
HPS4-217ENST00000496385 WDR41Q9HAD4 459 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 C12orf10Q9HB07 376 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 ZFYVE28Q9HCC9 887 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 RNF186Q9NXI6 227 aa9.22□□□□□ -0.93
HPS4-217ENST00000496385 NYAP2Q9P242 653 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms