RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 NOMO2Q5JPE7 1267 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 FAM102AQ5T9C2 384 aaPredicted RBP7.05□□□□□ -1.28
VIM-207ENST00000495528 NXNQ6DKJ4 435 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 GDF7Q7Z4P5 450 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 FITM2Q8N6M3 262 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 NLGN4YQ8NFZ3 816 aaPredicted RBP7.05□□□□□ -1.28
VIM-207ENST00000495528 GTF3C6Q969F1 213 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 KLHL5Q96PQ7 755 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 DCLRE1CQ96SD1 692 aaKnown RBP7.05□□□□□ -1.28
VIM-207ENST00000495528 RIT2Q99578 217 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 C1orf43Q9BWL3 253 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 UNC45AQ9H3U1 944 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 DNAJB4Q9UDY4 337 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 SLC45A2Q9UMX9 530 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 CFAP54Q96N23 3096 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 RIF1Q5UIP0 2472 aaKnown RBP7.05□□□□□ -1.28
VIM-207ENST00000495528 MYO15AQ9UKN7 3530 aa7.05□□□□□ -1.28
VIM-207ENST00000495528 C1QTNF3-AMACRE9PGA6 284 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 TRIM24O15164 1050 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 NARSO43776 548 aaKnown RBP7.04□□□□□ -1.28
VIM-207ENST00000495528 JAK2O60674 1132 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 N4BP1O75113 896 aaKnown RBP7.04□□□□□ -1.28
VIM-207ENST00000495528 HAUS5O94927 633 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 CNPP09543 421 aaKnown RBP7.04□□□□□ -1.28
VIM-207ENST00000495528 KLRC2P26717 231 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 SFNP31947 248 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 CLCN4P51793 760 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 JAK3P52333 1124 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 RCAN1P53805 252 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 NOMO3P69849 1222 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 RNASELQ05823 741 aaKnown RBP7.04□□□□□ -1.28
VIM-207ENST00000495528 ST3GAL1Q11201 340 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 ANGPT1Q15389 498 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 XKR3Q5GH77 459 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 LRCH2Q5VUJ6 765 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 METRNLQ641Q3 311 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 TWF2Q6IBS0 349 aaKnown RBP7.04□□□□□ -1.28
VIM-207ENST00000495528 CPLX2Q6PUV4 134 aaKnown RBP7.04□□□□□ -1.28
VIM-207ENST00000495528 CCDC149Q6ZUS6 474 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 RHPN2Q8IUC4 686 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 DENND1CQ8IV53 801 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 CCDC105Q8IYK2 499 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 IL17RDQ8NFM7 739 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 CCDC12Q8WUD4 166 aaPredicted RBP7.04□□□□□ -1.28
VIM-207ENST00000495528 PHKBQ93100 1093 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 ZSWIM1Q9BR11 485 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 TEKT3Q9BXF9 490 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 SLC26A6Q9BXS9 759 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 REXO4Q9GZR2 422 aaKnown RBP7.04□□□□□ -1.28
VIM-207ENST00000495528 SFXN1Q9H9B4 322 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 SUCLA2Q9P2R7 463 aaPredicted RBP7.04□□□□□ -1.28
VIM-207ENST00000495528 FEZ2Q9UHY8 353 aaPredicted RBP7.04□□□□□ -1.28
VIM-207ENST00000495528 DUSP12Q9UNI6 340 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 SMC3Q9UQE7 1217 aa7.04□□□□□ -1.28
VIM-207ENST00000495528 PIN4Q9Y237 131 aaKnown RBP7.04□□□□□ -1.28
VIM-207ENST00000495528 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.04□□□□□ -1.28
VIM-207ENST00000495528 FAM186AA6NE01 2351 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 DMDP11532 3685 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 VSTM5A8MXK1 200 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 PSMD10O75832 226 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 UBXN7O94888 489 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 AGFG2O95081 481 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 FDPSP14324 419 aaKnown RBP7.03□□□□□ -1.28
VIM-207ENST00000495528 IFNAR1P17181 557 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 SFPQP23246 707 aaKnown RBP eCLIP7.03□□□□□ -1.28
VIM-207ENST00000495528 HTR1BP28222 390 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 GJB2P29033 226 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 AKAP17AQ02040 695 aaKnown RBP7.03□□□□□ -1.28
VIM-207ENST00000495528 FOXE3Q13461 319 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 LETM2Q2VYF4 491 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 Q4G0T1 1027 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 CATSPER4Q7RTX7 472 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 MIER3Q7Z3K6 550 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 MRPL10Q7Z7H8 261 aaKnown RBP7.03□□□□□ -1.28
VIM-207ENST00000495528 ZNF410Q86VK4 478 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 ZNF276Q8N554 614 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 FAM184AQ8NB25 1140 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 OR56A1Q8NGH5 318 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 BICD2Q8TD16 824 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 TBCKQ8TEA7 893 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 RSPH1Q8WYR4 309 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 SLC35A4Q96G79 324 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 MARS2Q96GW9 593 aaKnown RBP7.03□□□□□ -1.28
VIM-207ENST00000495528 NLRP4Q96MN2 994 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 RTP3Q9BQQ7 232 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 LLPHQ9BRT6 129 aaKnown RBP7.03□□□□□ -1.28
VIM-207ENST00000495528 INO80BQ9C086 356 aaPredicted RBP7.03□□□□□ -1.28
VIM-207ENST00000495528 ZNF703Q9H7S9 590 aaPredicted RBP7.03□□□□□ -1.28
VIM-207ENST00000495528 SLC2A4RGQ9NR83 387 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 PNPOQ9NVS9 261 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 VPS54Q9P1Q0 977 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 ORC3Q9UBD5 711 aaPredicted RBP7.03□□□□□ -1.28
VIM-207ENST00000495528 PCDHB2Q9Y5E7 798 aa7.03□□□□□ -1.28
VIM-207ENST00000495528 CCDC195A0A1B0GUA6 201 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 GOLGA6CA6NDK9 693 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 GOLGA6BA6NDN3 693 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 NCR1O76036 304 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 CDKL5O76039 1030 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 TDP2O95551 362 aa7.02□□□□□ -1.29
VIM-207ENST00000495528 GOLGA6DP0CG33 693 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms