RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 FAM171A1Q5VUB5 890 aa3□□□□□ -1.93
LRIF1-203ENST00000494675 NAA35Q5VZE5 725 aa3□□□□□ -1.93
LRIF1-203ENST00000494675 SLC18B1Q6NT16 456 aa3□□□□□ -1.93
LRIF1-203ENST00000494675 YTHDF3Q7Z739 585 aaKnown RBP3□□□□□ -1.93
LRIF1-203ENST00000494675 ADGRG6Q86SQ4 1221 aa3□□□□□ -1.93
LRIF1-203ENST00000494675 GADD45GIP1Q8TAE8 222 aaPredicted RBP3□□□□□ -1.93
LRIF1-203ENST00000494675 CUL5Q93034 780 aa3□□□□□ -1.93
LRIF1-203ENST00000494675 RRP36Q96EU6 259 aaKnown RBP3□□□□□ -1.93
LRIF1-203ENST00000494675 IFT27Q9BW83 186 aa3□□□□□ -1.93
LRIF1-203ENST00000494675 QTRT1Q9BXR0 403 aaKnown RBP3□□□□□ -1.93
LRIF1-203ENST00000494675 UBA5Q9GZZ9 404 aa3□□□□□ -1.93
LRIF1-203ENST00000494675 XRN2Q9H0D6 950 aaKnown RBP eCLIP3□□□□□ -1.93
LRIF1-203ENST00000494675 IL21RQ9HBE5 538 aa3□□□□□ -1.93
LRIF1-203ENST00000494675 DHDHQ9UQ10 334 aa3□□□□□ -1.93
LRIF1-203ENST00000494675 TMEM98Q9Y2Y6 226 aa3□□□□□ -1.93
LRIF1-203ENST00000494675 SMIM35A0A1B0GVV1 85 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 TMEM247A6NEH6 219 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 WIPF3A6NGB9 483 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 J3KRW8 73 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 TULP3O75386 442 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 CBX6O95503 412 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 FCGR2AP12318 317 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 ELF1P32519 619 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 KRT9P35527 623 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 DDIT3P35638 169 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 GJC1P36383 396 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 SKIV2L2P42285 1042 aaKnown RBP2.99□□□□□ -1.93
LRIF1-203ENST00000494675 RPS13P62277 151 aaKnown RBP2.99□□□□□ -1.93
LRIF1-203ENST00000494675 RPP30P78346 268 aaKnown RBP2.99□□□□□ -1.93
LRIF1-203ENST00000494675 RHAGQ02094 409 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 CFHR1Q03591 330 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 ZNF91Q05481 1191 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 ZBTB16Q05516 673 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 GALNT2Q10471 571 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 PGM5Q15124 567 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 C5orf22Q49AR2 442 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 KIAA1755Q5JYT7 1200 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 AADACL2Q6P093 401 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 FAM57BQ71RH2 274 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 UBE2Q1Q7Z7E8 422 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 TSPYL6Q8N831 410 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 SCAIQ8N9R8 606 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 LSM14AQ8ND56 463 aaKnown RBP2.99□□□□□ -1.93
LRIF1-203ENST00000494675 RFWD2Q8NHY2 731 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 NOC3LQ8WTT2 800 aaKnown RBP2.99□□□□□ -1.93
LRIF1-203ENST00000494675 ST8SIA4Q92187 359 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 RNF125Q96EQ8 232 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 APOPT1Q96IL0 206 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 KRTAP4-3Q9BYR4 195 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 PAIP1Q9H074 479 aaKnown RBP2.99□□□□□ -1.93
LRIF1-203ENST00000494675 TTC12Q9H892 705 aaPredicted RBP2.99□□□□□ -1.93
LRIF1-203ENST00000494675 JMJD4Q9H9V9 463 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 Q9N2J8 555 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 NRIP3Q9NQ35 241 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 TMEM45AQ9NWC5 275 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 UPB1Q9UBR1 384 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 FAM90A7PA6NKC0 464 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 FAM90A22PA8MWA6 464 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 FAM90A12PA8MX19 464 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 FAM90A23PA8MXZ1 464 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 KCNU1A8MYU2 1149 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 RHODO00212 210 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 MBD4O95243 580 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 KLRC2P26717 231 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 PAFAH1B1P43034 410 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 GPD2P43304 727 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 MTNR1AP48039 350 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 NR1H2P55055 460 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 DDX10Q13206 875 aaKnown RBP2.99□□□□□ -1.93
LRIF1-203ENST00000494675 CAMK1Q14012 370 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 SEMA3AQ14563 771 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 DAZAP2Q15038 168 aaPredicted RBP2.99□□□□□ -1.93
LRIF1-203ENST00000494675 SUPT20HL1Q3ZLR7 823 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 SLC9C2Q5TAH2 1124 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 TMEM268Q5VZI3 342 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 TTLL5Q6EMB2 1281 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 SLC22A25Q6T423 547 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 ZNF793Q6ZN11 406 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 IGFN1Q86VF2 1251 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 CCDC25Q86WR0 208 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 GHDCQ8N2G8 530 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 TMEM217Q8N7C4 229 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 RUFY2Q8WXA3 655 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 CNOT9Q92600 299 aaKnown RBP2.99□□□□□ -1.93
LRIF1-203ENST00000494675 KAT2AQ92830 837 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 ZBTB10Q96DT7 871 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 SIGLEC11Q96RL6 698 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 TUBB6Q9BUF5 446 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 PHF7Q9BWX1 381 aaPredicted RBP2.99□□□□□ -1.93
LRIF1-203ENST00000494675 C1QTNF7Q9BXJ2 289 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 UNC45AQ9H3U1 944 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 PAPOLBQ9NRJ5 636 aaKnown RBP2.99□□□□□ -1.93
LRIF1-203ENST00000494675 IRAK4Q9NWZ3 460 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 UTS2RQ9UKP6 389 aa2.99□□□□□ -1.93
LRIF1-203ENST00000494675 COL3A1P02461 1466 aaPredicted RBP2.98□□□□□ -1.93
LRIF1-203ENST00000494675 OR6C68A6NDL8 312 aa2.98□□□□□ -1.93
LRIF1-203ENST00000494675 F8W810 466 aa2.98□□□□□ -1.93
LRIF1-203ENST00000494675 TNPO2O14787 897 aaKnown RBP2.98□□□□□ -1.93
LRIF1-203ENST00000494675 TSPAN4O14817 238 aa2.98□□□□□ -1.93
LRIF1-203ENST00000494675 TP73O15350 636 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms