RNA–Protein interactions for RNA: ENST00000494667.5

PRKD3-210, Transcript of protein kinase D3, humanhuman

TSL 1 (best)

Gene PRKD3, Length 4,326 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKD3-210ENST00000494667 PCDHB13Q9Y5F0 798 aa4.89□□□□□ -1.63
PRKD3-210ENST00000494667 ADGRA2Q96PE1 1338 aa4.89□□□□□ -1.63
PRKD3-210ENST00000494667 ABCA3Q99758 1704 aa4.89□□□□□ -1.63
PRKD3-210ENST00000494667 KBTBD13C9JR72 458 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ENPP3O14638 875 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ASNA1O43681 348 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 RPL22P35268 128 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 GNPDA1P46926 289 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 VAMP7P51809 220 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 NDST1P52848 882 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 IST1P53990 364 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CDH15P55291 814 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CTF1Q16619 201 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 PLA2G4EQ3MJ16 856 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 SLFN13Q68D06 897 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 RHPN2Q8IUC4 686 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CPNE9Q8IYJ1 553 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 THNSL1Q8IYQ7 743 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 TMCO5AQ8N6Q1 288 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 FBLIM1Q8WUP2 373 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ZNF566Q969W8 418 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 VPS33AQ96AX1 596 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CCDC124Q96CT7 223 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 SLC39A13Q96H72 371 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 RIPOR3Q96MK2 946 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CPXM1Q96SM3 734 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CYP2S1Q96SQ9 504 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 NXF2Q9GZY0 626 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 POLR1BQ9H9Y6 1135 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 FANCEQ9HB96 536 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ZBTB26Q9HCK0 441 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 TCF7L2Q9NQB0 619 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 FRMD4AQ9P2Q2 1039 aaPredicted RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 VTI1BQ9UEU0 232 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 FAM25AB3EWG3 89 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 FAM25CB3EWG5 89 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 FAM25GB3EWG6 89 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 PSMD11O00231 422 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 UPK1BO75841 260 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 GCNT3O95395 438 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 LDHCP07864 332 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 PCNAP12004 261 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 TCN1P20061 433 aaPredicted RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CLCNKBP51801 687 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CLDN10P78369 228 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 GNA12Q03113 381 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 BAMBIQ13145 260 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 STILQ15468 1287 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CRY1Q16526 586 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CEP55Q53EZ4 464 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 BRMS1LQ5PSV4 323 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 FAM122CQ6P4D5 195 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 XKRXQ6PP77 449 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ATG14Q6ZNE5 492 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 DBX2Q6ZNG2 339 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CYP4V2Q6ZWL3 525 aaPredicted RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 IGDCC3Q8IVU1 814 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CCDC28AQ8IWP9 274 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 OR6F1Q8NGZ6 308 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 LILRB1Q8NHL6 650 aaPredicted RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 RHOXF1Q8NHV9 184 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 PBXIP1Q96AQ6 731 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 HDAC11Q96DB2 347 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 MRRFQ96E11 262 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 GLT1D1Q96MS3 346 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 LENG8Q96PV6 779 aaPredicted RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ACO2Q99798 780 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 RNF38Q9H0F5 515 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 TMEM206Q9H813 350 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 WDR41Q9HAD4 459 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 EFCAB1Q9HAE3 211 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ALG13Q9NP73 1137 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 RAB20Q9NX57 234 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 STMN3Q9NZ72 180 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ANAPC2Q9UJX6 822 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 GRIP1Q9Y3R0 1128 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 PCDHGA7Q9Y5G6 932 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 PCDHGA3Q9Y5H0 932 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CSNK1G3Q9Y6M4 447 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 LTBP4Q8N2S1 1624 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CNTNAP1P78357 1384 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 SOCS2O14508 198 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 CCNE2O96020 404 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 ZSCAN5DPP0CG00 497 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 FCGR1AP12314 374 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 MAP4P27816 1152 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 KCNQ4P56696 695 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 EIF3EP60228 445 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 TRAF2Q12933 501 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 SKIV2LQ15477 1246 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 LIN9Q5TKA1 542 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 BROXQ5VW32 411 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 LETMD1Q6P1Q0 360 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 UNC5AQ6ZN44 842 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 C15orf52Q6ZUT6 534 aaKnown RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 IFNLR1Q8IU57 520 aaPredicted RBP4.88□□□□□ -1.63
PRKD3-210ENST00000494667 EPHX4Q8IUS5 362 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 DNAJC10Q8IXB1 793 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 GSDMBQ8TAX9 411 aa4.88□□□□□ -1.63
PRKD3-210ENST00000494667 RDH11Q8TC12 318 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms