RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 MBLAC1A4D2B0 266 aaPredicted RBP11.71□□□□□ -0.53
RFC4-214ENST00000494047 HDAC3O15379 428 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 AP1G1O43747 822 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 DUSP11O75319 330 aaKnown RBP11.71□□□□□ -0.53
RFC4-214ENST00000494047 RECQL4O94761 1208 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 PDHA1P08559 390 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 LCP1P13796 627 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 VAV1P15498 845 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 HOXB8P17481 243 aaPredicted RBP11.71□□□□□ -0.53
RFC4-214ENST00000494047 MGAT1P26572 445 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 PAPOLAP51003 745 aaKnown RBP11.71□□□□□ -0.53
RFC4-214ENST00000494047 TKTL1P51854 596 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 MTTPP55157 894 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 NAA20P61599 178 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 SLC10A2Q12908 348 aaPredicted RBP11.71□□□□□ -0.53
RFC4-214ENST00000494047 TUBB3Q13509 450 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 ADRM1Q16186 407 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 PRAMEF19Q5SWL8 479 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 LIPMQ5VYY2 423 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 EPGNQ6UW88 154 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 IZUMO2Q6UXV1 221 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 KIAA0408Q6ZU52 694 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 PID1Q7Z2X4 250 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 CLEC14AQ86T13 490 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 DEFB106AQ8N104 65 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 FBXW8Q8N3Y1 598 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 CCDC185Q8N715 623 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 C7orf31Q8N865 590 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 DNAAF3Q8N9W5 541 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 SLC7A14Q8TBB6 771 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 WDR60Q8WVS4 1066 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 KBTBD7Q8WVZ9 684 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 TSEN34Q9BSV6 310 aaKnown RBP11.71□□□□□ -0.53
RFC4-214ENST00000494047 APOL6Q9BWW8 343 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 RHOJQ9H4E5 214 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 PRDM12Q9H4Q4 367 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 SUDS3Q9H7L9 328 aaPredicted RBP11.71□□□□□ -0.53
RFC4-214ENST00000494047 TCF7L2Q9NQB0 619 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11.71□□□□□ -0.53
RFC4-214ENST00000494047 CPSF2Q9P2I0 782 aaKnown RBP11.71□□□□□ -0.53
RFC4-214ENST00000494047 THEGQ9P2T0 379 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 STK39Q9UEW8 545 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 EMCNQ9ULC0 261 aa11.71□□□□□ -0.53
RFC4-214ENST00000494047 FNDC1Q4ZHG4 1894 aaPredicted RBP11.71□□□□□ -0.53
RFC4-214ENST00000494047 A0A087X1B8 175 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 A0A088AWK7 358 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 RGSL1A5PLK6 1076 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 DPPA5A6NC42 116 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 ENO4A6NNW6 628 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 H0YJX3 145 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 FGF10O15520 208 aaPredicted RBP11.7□□□□□ -0.54
RFC4-214ENST00000494047 F2P00734 622 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 LINGO3P0C6S8 592 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 KITP10721 976 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 AMPD1P23109 780 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 PSMB4P28070 264 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 PCSK1P29120 753 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 ADORA2BP29275 332 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 HOXA11P31270 313 aaPredicted RBP11.7□□□□□ -0.54
RFC4-214ENST00000494047 IDH3AP50213 366 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 CACNA2D1P54289 1103 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 SESN2P58004 480 aaPredicted RBP11.7□□□□□ -0.54
RFC4-214ENST00000494047 RPL10AP62906 217 aaKnown RBP11.7□□□□□ -0.54
RFC4-214ENST00000494047 ADIGQ0VDE8 80 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 GALNT2Q10471 571 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 SEMA3BQ13214 749 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 MTA1Q13330 715 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 SLC12A1Q13621 1099 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 LAMB3Q13751 1172 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 HSP90AA5PQ58FG0 334 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 DCAF6Q58WW2 860 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 C1orf53Q5VUE5 145 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 IRAK1BP1Q5VVH5 260 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 SEL1L3Q68CR1 1132 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 TIGD7Q6NT04 549 aaPredicted RBP11.7□□□□□ -0.54
RFC4-214ENST00000494047 DCLRE1AQ6PJP8 1040 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 POTEHQ6S545 545 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 PIWIL4Q7Z3Z4 852 aaKnown RBP11.7□□□□□ -0.54
RFC4-214ENST00000494047 GALNT7Q86SF2 657 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 PIGZQ86VD9 579 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 KCNMB4Q86W47 210 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 CNTN4Q8IWV2 1026 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 HOMEZQ8IX15 550 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 ZNF567Q8N184 647 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 MPP5Q8N3R9 675 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 CPSF7Q8N684 471 aaKnown RBP11.7□□□□□ -0.54
RFC4-214ENST00000494047 CNTD1Q8N815 330 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 ICA1LQ8NDH6 482 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 OR6J1Q8NGC5 347 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 CALML6Q8TD86 181 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 SLC2A14Q8TDB8 520 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 ZNF669Q96BR6 464 aaPredicted RBP11.7□□□□□ -0.54
RFC4-214ENST00000494047 IFT43Q96FT9 208 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 TSGA13Q96PP4 275 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 GPR22Q99680 433 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 DRC3Q9H069 523 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 NMRAL1Q9HBL8 299 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 PAPOLBQ9NRJ5 636 aaKnown RBP11.7□□□□□ -0.54
RFC4-214ENST00000494047 SYBUQ9NX95 663 aa11.7□□□□□ -0.54
RFC4-214ENST00000494047 MARCOQ9UEW3 520 aaPredicted RBP11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms