RNA–Protein interactions for RNA: ENST00000493949.1

PDLIM1-205, Transcript of PDZ and LIM domain 1, humanhuman

TSL 3

Gene PDLIM1, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-205ENST00000493949 RAI2Q9Y5P3 530 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 PTPRQQ9UMZ3 2332 aa10.92□□□□□ -0.66
PDLIM1-205ENST00000493949 A0A087WV48 116 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 ANKRD33BA6NCL7 494 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 TMEM110-MUSTN1A8MSY1 372 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 SYN3O14994 580 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 RECQL4O94761 1208 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 TJP3O95049 919 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 PRB1P04280 392 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 PRKCBP05771 671 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 GARTP22102 1010 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 ARL2P36404 184 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 CLCNKBP51801 687 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 RPL26P61254 145 aaKnown RBP10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 TNK2Q07912 1038 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 PPP3CAQ08209 521 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 TWF1Q12792 350 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 KPNB1Q14974 876 aaKnown RBP10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 LRRC14Q15048 493 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 PDCD2Q16342 344 aaPredicted RBP10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 KYNUQ16719 465 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 FBXO43Q4G163 708 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 USP39Q53GS9 565 aaKnown RBP10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 TRIM61Q5EBN2 209 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 EFHC2Q5JST6 749 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 C1orf220Q5T0J3 134 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 SLC23A3Q6PIS1 610 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 SLC30A9Q6PML9 568 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 PADI6Q6TGC4 694 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 CENPUQ71F23 418 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 RCOR2Q8IZ40 523 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 MCOLN2Q8IZK6 566 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 PPFIBP2Q8ND30 876 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 MGARPQ8TDB4 240 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 BPIFB1Q8TDL5 484 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 SPIRE2Q8WWL2 714 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 DNAJC9Q8WXX5 260 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 KREMEN1Q96MU8 473 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 PPP1R10Q96QC0 940 aaKnown RBP10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 NR1H4Q96RI1 486 aaPredicted RBP10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 NUDCD1Q96RS6 583 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 RBM15Q96T37 977 aaKnown RBP eCLIP10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 NUSAP1Q9BXS6 441 aaKnown RBP10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 FRMD8Q9BZ67 464 aaPredicted RBP10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 MYLK2Q9H1R3 596 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 TRABDQ9H4I3 376 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 PCDH9Q9HC56 1237 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 POLR3BQ9NW08 1133 aaPredicted RBP10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 DDX56Q9NY93 547 aaKnown RBP10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 IL1RAPL1Q9NZN1 696 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 ZNF212Q9UDV6 495 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 STK38LQ9Y2H1 464 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 PCDHGA4Q9Y5G9 962 aa10.91□□□□□ -0.66
PDLIM1-205ENST00000493949 MGAQ8IWI9 3026 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 USP9XQ93008 2570 aaPredicted RBP10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 OBSL1O75147 1896 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 A0A1W2PRU2 124 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 KLHL33A6NCF5 533 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 F8W8V4 182 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 H7C4K7 107 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 KLF11O14901 512 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 ALOX15BO15296 676 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 TYROBPO43914 113 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 EGFP01133 1207 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 CYP1A1P04798 512 aaPredicted RBP10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 ENGP17813 658 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 DRD1P21728 446 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 CHKAP35790 457 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 NSFP46459 744 aaKnown RBP10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 RAD23BP54727 409 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 ARPP19P56211 112 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 MGAT5Q09328 741 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 DYNC1I2Q13409 638 aaKnown RBP10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 DMC1Q14565 340 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 FAM187BQ17R55 369 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 HHATQ5VTY9 493 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 PEAR1Q5VY43 1037 aaPredicted RBP10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 EEF1DP3Q658K8 133 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 OTUD6AQ7L8S5 288 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 RASSF3Q86WH2 238 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 PHF13Q86YI8 300 aaPredicted RBP10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 SCUBE3Q8IX30 993 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 DAW1Q8N136 415 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 PPM1KQ8N3J5 372 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 TTC13Q8NBP0 860 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 FAM13CQ8NE31 585 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 BEST2Q8NFU1 509 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 RAB3IL1Q8TBN0 382 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 BICD1Q96G01 975 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 TSC22D3Q99576 134 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 FAM83CQ9BQN1 747 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 SIKE1Q9BRV8 207 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 TBC1D10AQ9BXI6 508 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 OSBPL8Q9BZF1 889 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 POLR3FQ9H1D9 316 aaPredicted RBP10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 PDZD7Q9H5P4 517 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 RAB20Q9NX57 234 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 PDP2Q9P2J9 529 aa10.9□□□□□ -0.66
PDLIM1-205ENST00000493949 IP6K2Q9UHH9 426 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms