RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 OR6C4Q8NGE1 309 aa11.86□□□□□ -0.51
BRCA1-222ENST00000493919 RUBCNQ92622 972 aa11.86□□□□□ -0.51
BRCA1-222ENST00000493919 CYFIP2Q96F07 1278 aa11.86□□□□□ -0.51
BRCA1-222ENST00000493919 MKNK1Q9BUB5 465 aa11.86□□□□□ -0.51
BRCA1-222ENST00000493919 EHD1Q9H4M9 534 aa11.86□□□□□ -0.51
BRCA1-222ENST00000493919 GIN1Q9NXP7 522 aa11.86□□□□□ -0.51
BRCA1-222ENST00000493919 REV1Q9UBZ9 1251 aa11.86□□□□□ -0.51
BRCA1-222ENST00000493919 RWDD2AQ9UIY3 292 aa11.86□□□□□ -0.51
BRCA1-222ENST00000493919 SLC12A4Q9UP95 1085 aa11.86□□□□□ -0.51
BRCA1-222ENST00000493919 TBC1D30Q9Y2I9 924 aa11.86□□□□□ -0.51
BRCA1-222ENST00000493919 TIMM13Q9Y5L4 95 aaPredicted RBP11.86□□□□□ -0.51
BRCA1-222ENST00000493919 TSC2P49815 1807 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 ZSCAN5BA6NJL1 495 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 MIF4GDA9UHW6 222 aaKnown RBP11.85□□□□□ -0.51
BRCA1-222ENST00000493919 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-222ENST00000493919 SLC16A3O15427 465 aaKnown RBP11.85□□□□□ -0.51
BRCA1-222ENST00000493919 EFEMP2O95967 443 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 SERPINB3P29508 390 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 CTNNA1P35221 906 aaKnown RBP11.85□□□□□ -0.51
BRCA1-222ENST00000493919 ATP6V1E1P36543 226 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 LILRA4P59901 499 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 HYAL1Q12794 435 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 SCARA3Q6AZY7 606 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 SPOPLQ6IQ16 392 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 MMAAQ8IVH4 418 aaKnown RBP11.85□□□□□ -0.51
BRCA1-222ENST00000493919 PALM2Q8IXS6 379 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 CYP4X1Q8N118 509 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 NAT14Q8WUY8 206 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 E2F7Q96AV8 911 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 COX4I2Q96KJ9 171 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 SUSD3Q96L08 255 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 NUSAP1Q9BXS6 441 aaKnown RBP11.85□□□□□ -0.51
BRCA1-222ENST00000493919 EMILIN2Q9BXX0 1053 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 PALMDQ9NP74 551 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 POLE3Q9NRF9 147 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 CHST7Q9NS84 486 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 PAQR5Q9NXK6 330 aaPredicted RBP11.85□□□□□ -0.51
BRCA1-222ENST00000493919 ATP6V1HQ9UI12 483 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 SIX4Q9UIU6 781 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 IFT52Q9Y366 437 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 STON1Q9Y6Q2 735 aa11.85□□□□□ -0.51
BRCA1-222ENST00000493919 GOLGA8SH3BPF8 625 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 ALOX15BO15296 676 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 IFNA14P01570 189 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 PDHA1P08559 390 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 CNPP09543 421 aaKnown RBP11.84□□□□□ -0.51
BRCA1-222ENST00000493919 PABPC4LP0CB38 370 aaKnown RBP11.84□□□□□ -0.51
BRCA1-222ENST00000493919 ODC1P11926 461 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 FGFR3P22607 806 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 PNPLA4P41247 253 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 GCLMP48507 274 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 VPS41P49754 854 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 GALK1P51570 392 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 SRP54P61011 504 aaKnown RBP11.84□□□□□ -0.51
BRCA1-222ENST00000493919 RBP5P82980 135 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 TRPC3Q13507 836 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 STX1AQ16623 288 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 TDRD10Q5VZ19 366 aaKnown RBP11.84□□□□□ -0.51
BRCA1-222ENST00000493919 CDH26Q8IXH8 852 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 ZC3H3Q8IXZ2 948 aaKnown RBP11.84□□□□□ -0.51
BRCA1-222ENST00000493919 GAB3Q8WWW8 586 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 ZNF516Q92618 1163 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 SENP8Q96LD8 212 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 VPS35Q96QK1 796 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 CLDND1Q9NY35 253 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 GPRC5BQ9NZH0 403 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 EHD3Q9NZN3 535 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 LUZP4Q9P127 313 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 ARMCX3Q9UH62 379 aaPredicted RBP11.84□□□□□ -0.51
BRCA1-222ENST00000493919 TEKT2Q9UIF3 430 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 CDC23Q9UJX2 597 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 GTF2A1LQ9UNN4 478 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 APOBEC2Q9Y235 224 aaKnown RBP11.84□□□□□ -0.51
BRCA1-222ENST00000493919 USH1CQ9Y6N9 552 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 KPNA7A9QM74 516 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 SYN3O14994 580 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 LINC01565O15544 149 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 NDUFA2O43678 99 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 KRT7P08729 469 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 KLRC2P26717 231 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 ATP5OP48047 213 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 IST1P53990 364 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 PFKPQ01813 784 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 ENPEPQ07075 957 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 DHX9Q08211 1270 aaKnown RBP11.84□□□□□ -0.51
BRCA1-222ENST00000493919 PDCLQ13371 301 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 PHKG1Q16816 387 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 VARS2Q5ST30 1063 aaKnown RBP11.84□□□□□ -0.51
BRCA1-222ENST00000493919 AADACL4Q5VUY2 407 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 KIAA0319Q5VV43 1072 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 CCNJLQ8IV13 435 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.84□□□□□ -0.51
BRCA1-222ENST00000493919 ARHGAP24Q8N264 748 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 LRRC52Q8N7C0 313 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 PDZD8Q8NEN9 1154 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 DNAJC9Q8WXX5 260 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 HPDLQ96IR7 371 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 CNDP2Q96KP4 475 aaKnown RBP11.84□□□□□ -0.51
BRCA1-222ENST00000493919 C9orf16Q9BUW7 83 aa11.84□□□□□ -0.51
BRCA1-222ENST00000493919 ATP13A3Q9H7F0 1226 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms