RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 LINGO4Q6UY18 593 aa19.81■□□□□ 0.76
USP39-218ENST00000493829 CCDC13Q8IYE1 715 aa19.81■□□□□ 0.76
USP39-218ENST00000493829 FAM71DQ8N9W8 422 aa19.81■□□□□ 0.76
USP39-218ENST00000493829 USP33Q8TEY7 942 aa19.81■□□□□ 0.76
USP39-218ENST00000493829 NXPE3Q969Y0 559 aa19.81■□□□□ 0.76
USP39-218ENST00000493829 CHFRQ96EP1 664 aa19.81■□□□□ 0.76
USP39-218ENST00000493829 INTS6Q9UL03 887 aaKnown RBP19.81■□□□□ 0.76
USP39-218ENST00000493829 MAFKO60675 156 aa19.8■□□□□ 0.76
USP39-218ENST00000493829 OPRD1P41143 372 aa19.8■□□□□ 0.76
USP39-218ENST00000493829 FNTAP49354 379 aa19.8■□□□□ 0.76
USP39-218ENST00000493829 XRCC4Q13426 336 aa19.8■□□□□ 0.76
USP39-218ENST00000493829 GEN1Q17RS7 908 aa19.8■□□□□ 0.76
USP39-218ENST00000493829 PLEKHG6Q3KR16 790 aa19.8■□□□□ 0.76
USP39-218ENST00000493829 ZNF783Q6ZMS7 281 aa19.8■□□□□ 0.76
USP39-218ENST00000493829 LMLNQ96KR4 655 aa19.8■□□□□ 0.76
USP39-218ENST00000493829 HEBP1Q9NRV9 189 aa19.8■□□□□ 0.76
USP39-218ENST00000493829 DEC1Q9P2X7 70 aa19.8■□□□□ 0.76
USP39-218ENST00000493829 VPS51Q9UID3 782 aa19.8■□□□□ 0.76
USP39-218ENST00000493829 OR51B4Q9Y5P0 310 aa19.8■□□□□ 0.76
USP39-218ENST00000493829 CHD5Q8TDI0 1954 aa19.79■□□□□ 0.76
USP39-218ENST00000493829 HACD1B0YJ81 288 aa19.79■□□□□ 0.76
USP39-218ENST00000493829 IFNB1P01574 187 aa19.79■□□□□ 0.76
USP39-218ENST00000493829 ETS1P14921 441 aa19.79■□□□□ 0.76
USP39-218ENST00000493829 ETFBP38117 255 aa19.79■□□□□ 0.76
USP39-218ENST00000493829 CLCN6P51797 869 aa19.79■□□□□ 0.76
USP39-218ENST00000493829 TDGQ13569 410 aa19.79■□□□□ 0.76
USP39-218ENST00000493829 TRIP13Q15645 432 aaPredicted RBP19.79■□□□□ 0.76
USP39-218ENST00000493829 IER5LQ5T953 404 aa19.79■□□□□ 0.76
USP39-218ENST00000493829 SFTPA1Q8IWL2 248 aa19.79■□□□□ 0.76
USP39-218ENST00000493829 HTR3CQ8WXA8 447 aa19.79■□□□□ 0.76
USP39-218ENST00000493829 ALG14Q96F25 216 aa19.79■□□□□ 0.76
USP39-218ENST00000493829 SLC2A11Q9BYW1 496 aa19.79■□□□□ 0.76
USP39-218ENST00000493829 HPCAL4Q9UM19 191 aa19.79■□□□□ 0.76
USP39-218ENST00000493829 F5H423 210 aaPredicted RBP19.78■□□□□ 0.76
USP39-218ENST00000493829 RNF103O00237 685 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 SLU7O95391 586 aaKnown RBP19.78■□□□□ 0.76
USP39-218ENST00000493829 ECEL1O95672 775 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 ITGAVP06756 1048 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 CTSOP43234 321 aaPredicted RBP19.78■□□□□ 0.76
USP39-218ENST00000493829 VPS41P49754 854 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 DR1Q01658 176 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 TEX35Q5T0J7 233 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 DRICH1Q6PGQ1 229 aaPredicted RBP19.78■□□□□ 0.76
USP39-218ENST00000493829 TAB3Q8N5C8 712 aaPredicted RBP19.78■□□□□ 0.76
USP39-218ENST00000493829 ZNF557Q8N988 423 aaPredicted RBP19.78■□□□□ 0.76
USP39-218ENST00000493829 DCAF4L2Q8NA75 395 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 GLIS1Q8NBF1 620 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 SORCS1Q8WY21 1168 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 ACE2Q9BYF1 805 aaPredicted RBP19.78■□□□□ 0.76
USP39-218ENST00000493829 CIPCQ9C0C6 399 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 PRKAG3Q9UGI9 489 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 TTLL3Q9Y4R7 772 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 PIAS3Q9Y6X2 628 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 BCLAF3A2AJT9 711 aaKnown RBP19.78■□□□□ 0.76
USP39-218ENST00000493829 TTI1O43156 1089 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 KDELR3O43731 214 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 PRAMEF11O60813 436 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 CISD3P0C7P0 127 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 ZSCAN5DPP0CG00 497 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 ARF5P84085 180 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 ZBTB17Q13105 803 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 TIGD7Q6NT04 549 aaPredicted RBP19.78■□□□□ 0.76
USP39-218ENST00000493829 C8orf74Q6P047 294 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 AHI1Q8N157 1196 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.78■□□□□ 0.76
USP39-218ENST00000493829 ALLCQ8N6M5 410 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 TRIM51Q9BSJ1 452 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 C2orf49Q9BVC5 232 aaPredicted RBP19.78■□□□□ 0.76
USP39-218ENST00000493829 FBXO10Q9UK96 956 aa19.78■□□□□ 0.76
USP39-218ENST00000493829 TCF20Q9UGU0 1960 aaKnown RBP19.77■□□□□ 0.76
USP39-218ENST00000493829 SPECC1L-ADORA2AF8WAN1 911 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 RAD51CO43502 376 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 CCNCP24863 283 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 STK19P49842 368 aaPredicted RBP19.77■□□□□ 0.76
USP39-218ENST00000493829 TERF1P54274 439 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 IL10RBQ08334 325 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 PPP1R7Q15435 360 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 TMEM215Q68D42 235 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 MBLAC2Q68D91 279 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 ADIPOR2Q86V24 386 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 CCDC89Q8N998 374 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 ATL2Q8NHH9 583 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 CCDC110Q8TBZ0 833 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 CYB5D2Q8WUJ1 264 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 ZNF419Q96HQ0 510 aaPredicted RBP19.77■□□□□ 0.76
USP39-218ENST00000493829 TSGA13Q96PP4 275 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 HINFPQ9BQA5 517 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 BRD8Q9H0E9 1235 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 PDFQ9HBH1 243 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 USP29Q9HBJ7 922 aa19.77■□□□□ 0.76
USP39-218ENST00000493829 UBA2Q9UBT2 640 aaPredicted RBP19.77■□□□□ 0.76
USP39-218ENST00000493829 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.77■□□□□ 0.76
USP39-218ENST00000493829 V9GYY5 206 aaPredicted RBP19.77■□□□□ 0.76
USP39-218ENST00000493829 ZMPSTE24O75844 475 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 NEBLO76041 1014 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 JCHAINP01591 159 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 SRFP11831 508 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 CCNB1P14635 433 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 CTHP32929 405 aa19.76■□□□□ 0.75
USP39-218ENST00000493829 PTGIRP43119 386 aa19.76■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms