RNA–Protein interactions for RNA: ENST00000492601.2

SGMS1-204, Transcript of sphingomyelin synthase 1, humanhuman

TSL 1 (best)

Gene SGMS1, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-204ENST00000492601 SLC25A52Q3SY17 297 aa17.72■□□□□ 0.43
SGMS1-204ENST00000492601 CT47A1Q5JQC4 288 aaPredicted RBP17.72■□□□□ 0.43
SGMS1-204ENST00000492601 NAA35Q5VZE5 725 aa17.72■□□□□ 0.43
SGMS1-204ENST00000492601 TBC1D3GQ6DHY5 549 aa17.72■□□□□ 0.43
SGMS1-204ENST00000492601 TBC1D3CQ6IPX1 549 aa17.72■□□□□ 0.43
SGMS1-204ENST00000492601 TRNP1Q6NT89 227 aa17.72■□□□□ 0.43
SGMS1-204ENST00000492601 DBX2Q6ZNG2 339 aa17.72■□□□□ 0.43
SGMS1-204ENST00000492601 GLRX5Q86SX6 157 aa17.72■□□□□ 0.43
SGMS1-204ENST00000492601 TBC1D3Q8IZP1 549 aaPredicted RBP17.72■□□□□ 0.43
SGMS1-204ENST00000492601 BAHD1Q8TBE0 780 aaPredicted RBP17.72■□□□□ 0.43
SGMS1-204ENST00000492601 EPS8L1Q8TE68 723 aa17.72■□□□□ 0.43
SGMS1-204ENST00000492601 SLC20A1Q8WUM9 679 aa17.72■□□□□ 0.43
SGMS1-204ENST00000492601 ADAMTS14Q8WXS8 1223 aa17.72■□□□□ 0.43
SGMS1-204ENST00000492601 ZCCHC14Q8WYQ9 949 aaKnown RBP17.72■□□□□ 0.43
SGMS1-204ENST00000492601 PGAP3Q96FM1 320 aaPredicted RBP17.72■□□□□ 0.43
SGMS1-204ENST00000492601 GANQ9H2C0 597 aa17.72■□□□□ 0.43
SGMS1-204ENST00000492601 MPP6Q9NZW5 540 aa17.72■□□□□ 0.43
SGMS1-204ENST00000492601 TMEM8BA6NDV4 472 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 WNT9AO14904 365 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 VILLO15195 856 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 SNAP91O60641 907 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 GFPT2O94808 682 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 MT-CO1P00395 513 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 F9P00740 461 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 ATXN1LP0C7T5 689 aaKnown RBP17.71■□□□□ 0.43
SGMS1-204ENST00000492601 SCNN1AP37088 669 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 CCR5P51681 352 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 NOMO3P69849 1222 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 KRT31Q15323 416 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 LRRC31Q6UY01 552 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 TFAP2DQ7Z6R9 452 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 DSG4Q86SJ6 1040 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 ZNF683Q8IZ20 524 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 SH2D3CQ8N5H7 860 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 MSANTD4Q8NCY6 345 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 ENOX1Q8TC92 643 aaKnown RBP17.71■□□□□ 0.43
SGMS1-204ENST00000492601 CFAP57Q96MR6 1250 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 PSMB7Q99436 277 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 CDC6Q99741 560 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 NLRC4Q9NPP4 1024 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 PAXBP1Q9Y5B6 917 aa17.71■□□□□ 0.43
SGMS1-204ENST00000492601 APC2O95996 2303 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 FAM221BA6H8Z2 402 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 E9PAM4 449 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 SRGAP2O75044 1071 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 SRCP12931 536 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 CD38P28907 300 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 MAT2AP31153 395 aaKnown RBP17.7■□□□□ 0.42
SGMS1-204ENST00000492601 VASPP50552 380 aaPredicted RBP17.7■□□□□ 0.42
SGMS1-204ENST00000492601 POLR2FP61218 127 aaKnown RBP17.7■□□□□ 0.42
SGMS1-204ENST00000492601 KRT83P78385 493 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 CNTN1Q12860 1018 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 CDKAL1Q5VV42 579 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 FAM46CQ5VWP2 391 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 CLEC17AQ6ZS10 378 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 PHLDB2Q86SQ0 1253 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 PIP4K2CQ8TBX8 421 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 GPT2Q8TD30 523 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 SKA1Q96BD8 255 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 SERAC1Q96JX3 654 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 FAM207AQ9NSI2 230 aaPredicted RBP17.7■□□□□ 0.42
SGMS1-204ENST00000492601 VPS51Q9UID3 782 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 TMEM59LQ9UK28 342 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 NOCTQ9UK39 431 aaKnown RBP17.7■□□□□ 0.42
SGMS1-204ENST00000492601 PPM1HQ9ULR3 514 aa17.7■□□□□ 0.42
SGMS1-204ENST00000492601 MYLKQ15746 1914 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 DRGXA6NNA5 263 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 C10orf142B7Z368 130 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 K7ERQ8 282 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 MCF2LO15068 1137 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 EPHB6O15197 1021 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 PCDHGA12O60330 932 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 TPM2P07951 284 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 RRM1P23921 792 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 GRK6P43250 576 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 CCDC157Q569K6 752 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 LINGO4Q6UY18 593 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 FAM131BQ86XD5 332 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 GATAD2AQ86YP4 633 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 EMC1Q8N766 993 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 ATP11CQ8NB49 1132 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 C1orf74Q96LT6 269 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 C2orf49Q9BVC5 232 aaPredicted RBP17.69■□□□□ 0.42
SGMS1-204ENST00000492601 METTL5Q9NRN9 209 aaKnown RBP17.69■□□□□ 0.42
SGMS1-204ENST00000492601 FANCLQ9NW38 375 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 TOR4AQ9NXH8 423 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 RALYQ9UKM9 306 aaKnown RBP17.69■□□□□ 0.42
SGMS1-204ENST00000492601 HS3ST2Q9Y278 367 aa17.69■□□□□ 0.42
SGMS1-204ENST00000492601 COL5A1P20908 1838 aaPredicted RBP17.68■□□□□ 0.42
SGMS1-204ENST00000492601 A0A0D9SEW6 157 aa17.68■□□□□ 0.42
SGMS1-204ENST00000492601 A0A1B0GTQ1 180 aa17.68■□□□□ 0.42
SGMS1-204ENST00000492601 A0A1W2PR77 199 aa17.68■□□□□ 0.42
SGMS1-204ENST00000492601 C1QTNF3-AMACRE9PGA6 284 aa17.68■□□□□ 0.42
SGMS1-204ENST00000492601 LAMA5O15230 3695 aa17.68■□□□□ 0.42
SGMS1-204ENST00000492601 ALOX15BO15296 676 aa17.68■□□□□ 0.42
SGMS1-204ENST00000492601 SMAD6O43541 496 aaKnown RBP17.68■□□□□ 0.42
SGMS1-204ENST00000492601 PLRG1O43660 514 aaKnown RBP17.68■□□□□ 0.42
SGMS1-204ENST00000492601 CHRNB2P17787 502 aa17.68■□□□□ 0.42
SGMS1-204ENST00000492601 GLDCP23378 1020 aa17.68■□□□□ 0.42
SGMS1-204ENST00000492601 OR1E1P30953 314 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms