RNA–Protein interactions for RNA: ENST00000492539.5

NELFE-212, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-212ENST00000492539 FEM1AQ9BSK4 669 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 PPM1HQ9ULR3 514 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 PCDHGC3Q9UN70 934 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 OR51B4Q9Y5P0 310 aa20.46■□□□□ 0.87
NELFE-212ENST00000492539 SYNJ2BP-COX16A0A087WUM0 186 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 MCF2LO15068 1137 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 HSF2BPO75031 334 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 CNTN1Q12860 1018 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 OVGP1Q12889 678 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 MTA1Q13330 715 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 ILKQ13418 452 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 AUHQ13825 339 aaKnown RBP20.45■□□□□ 0.86
NELFE-212ENST00000492539 C5orf22Q49AR2 442 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 C6orf118Q5T5N4 469 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 CAVIN1Q6NZI2 390 aaKnown RBP20.45■□□□□ 0.86
NELFE-212ENST00000492539 SASS6Q6UVJ0 657 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 PPP1R13BQ96KQ4 1090 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 PPP1R9BQ96SB3 815 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 COX16Q9P0S2 106 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 HS3ST4Q9Y661 456 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 ASXL3Q9C0F0 2248 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 SHROOM3Q8TF72 1996 aa20.45■□□□□ 0.86
NELFE-212ENST00000492539 C1QTNF3-AMACRE9PGA6 284 aa20.44■□□□□ 0.86
NELFE-212ENST00000492539 MAGEC1O60732 1142 aa20.44■□□□□ 0.86
NELFE-212ENST00000492539 MAT2AP31153 395 aaKnown RBP20.44■□□□□ 0.86
NELFE-212ENST00000492539 TARDBPQ13148 414 aaKnown RBP eCLIP20.44■□□□□ 0.86
NELFE-212ENST00000492539 DLG2Q15700 870 aa20.44■□□□□ 0.86
NELFE-212ENST00000492539 HES3Q5TGS1 186 aa20.44■□□□□ 0.86
NELFE-212ENST00000492539 OLFML1Q6UWY5 402 aa20.44■□□□□ 0.86
NELFE-212ENST00000492539 FAM183BPQ6ZVS7 135 aa20.44■□□□□ 0.86
NELFE-212ENST00000492539 SH2D3CQ8N5H7 860 aa20.44■□□□□ 0.86
NELFE-212ENST00000492539 PIP4K2CQ8TBX8 421 aa20.44■□□□□ 0.86
NELFE-212ENST00000492539 RNF34Q969K3 372 aa20.44■□□□□ 0.86
NELFE-212ENST00000492539 CRACR2AQ9BSW2 395 aa20.44■□□□□ 0.86
NELFE-212ENST00000492539 VANGL2Q9ULK5 521 aa20.44■□□□□ 0.86
NELFE-212ENST00000492539 TBC1D30Q9Y2I9 924 aa20.44■□□□□ 0.86
NELFE-212ENST00000492539 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP20.43■□□□□ 0.86
NELFE-212ENST00000492539 GRAP2O75791 330 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 CKMT2P17540 419 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 SLC9A1P19634 815 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 ABCG1P45844 678 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 TAS2R38P59533 333 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 ZNF177Q13360 481 aaPredicted RBP20.43■□□□□ 0.86
NELFE-212ENST00000492539 RTP5Q14D33 572 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 STX1AQ16623 288 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 ACCSLQ4AC99 568 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 SMYD5Q6GMV2 418 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 Q6ZVU0 165 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 SHC3Q92529 594 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 DCBLD2Q96PD2 775 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 NRSN2Q9GZP1 204 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 PREBQ9HCU5 417 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 ANO10Q9NW15 660 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 APEX2Q9UBZ4 518 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 GCN1Q92616 2671 aaKnown RBP20.43■□□□□ 0.86
NELFE-212ENST00000492539 DOCK4Q8N1I0 1966 aa20.43■□□□□ 0.86
NELFE-212ENST00000492539 PRAMEF26H0Y7S4 382 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 TLX3O43711 291 aaPredicted RBP20.42■□□□□ 0.86
NELFE-212ENST00000492539 CLDN11O75508 207 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 DAB1O75553 588 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 GGCXP38435 758 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 EIF2S3P41091 472 aaKnown RBP20.42■□□□□ 0.86
NELFE-212ENST00000492539 CDH4P55283 916 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 APBA1Q02410 837 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 STAT4Q14765 748 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 ARHGAP44Q17R89 818 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 PROX2Q3B8N5 592 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 SETMARQ53H47 684 aaPredicted RBP20.42■□□□□ 0.86
NELFE-212ENST00000492539 OTUD1Q5VV17 481 aaPredicted RBP20.42■□□□□ 0.86
NELFE-212ENST00000492539 C11orf57Q6ZUT1 292 aaPredicted RBP20.42■□□□□ 0.86
NELFE-212ENST00000492539 SLC26A9Q7LBE3 791 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 C14orf80Q86SX3 495 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 PASD1Q8IV76 773 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 CACTIN-AS1Q8N1I8 211 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 RFFLQ8WZ73 363 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 VPS28Q9UK41 221 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 HS3ST2Q9Y278 367 aa20.42■□□□□ 0.86
NELFE-212ENST00000492539 TDRD6O60522 2096 aaKnown RBP20.41■□□□□ 0.86
NELFE-212ENST00000492539 RNGTTO60942 597 aaKnown RBP20.41■□□□□ 0.86
NELFE-212ENST00000492539 PAGE1O75459 146 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 ERBB2P04626 1255 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 CTSLP07711 333 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 SRCP12931 536 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 ACP1P24666 158 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 NOS2P35228 1153 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 USP8P40818 1118 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 NME3Q13232 169 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 SKOR2Q2VWA4 1001 aaPredicted RBP20.41■□□□□ 0.86
NELFE-212ENST00000492539 POM121L1PQ3SYA9 428 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 PIP5KL1Q5T9C9 394 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 OR6B2Q6IFH4 312 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 TMEM145Q8NBT3 493 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 C1orf131Q8NDD1 294 aaKnown RBP20.41■□□□□ 0.86
NELFE-212ENST00000492539 ZNF397Q8NF99 534 aaPredicted RBP20.41■□□□□ 0.86
NELFE-212ENST00000492539 PSMB7Q99436 277 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 CA5BQ9Y2D0 317 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 PTPRQQ9UMZ3 2332 aa20.41■□□□□ 0.86
NELFE-212ENST00000492539 GTPBP10A4D1E9 387 aaKnown RBP20.4■□□□□ 0.86
NELFE-212ENST00000492539 ZNF18P17022 549 aa20.4■□□□□ 0.86
NELFE-212ENST00000492539 SLC6A3Q01959 620 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms