RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 MMP8P22894 467 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 SLC6A4P31645 630 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 HARS2P49590 506 aaKnown RBP9.67□□□□□ -0.86
BRCA1-219ENST00000491747 RING1Q06587 406 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 RIPK1Q13546 671 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 E2F5Q15329 346 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 CLEC16AQ2KHT3 1053 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 SEL1L2Q5TEA6 688 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 LRRC34Q8IZ02 419 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 CPXM2Q8N436 756 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 PRRX2Q99811 253 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 SEMA4AQ9H3S1 761 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 NOD2Q9HC29 1040 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 HOMER3Q9NSC5 361 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 GRHL1Q9NZI5 618 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 CTTNBP2NLQ9P2B4 639 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 BAIAP2L1Q9UHR4 511 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 HCN2Q9UL51 889 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 TLR6Q9Y2C9 796 aa9.67□□□□□ -0.86
BRCA1-219ENST00000491747 ARIH1Q9Y4X5 557 aaPredicted RBP9.67□□□□□ -0.86
BRCA1-219ENST00000491747 A0A0A0MRY4 1105 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 GOLGA8SH3BPF8 625 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 CACNG3O60359 315 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 DAB1O75553 588 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 KAT7O95251 611 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 PENKP01210 267 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 SP9P0CG40 484 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 TDGF1P13385 188 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 CTNNA2P26232 953 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 CHKAP35790 457 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 EIF2DP41214 584 aaKnown RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 PTGIRP43119 386 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 RPL21P46778 160 aaKnown RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 PTPN5P54829 565 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 SEC13P55735 322 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 IFI35P80217 286 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 NHLH1Q02575 133 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 CENPCQ03188 943 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 FAM133BQ5BKY9 247 aaKnown RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 ZC3H12AQ5D1E8 599 aaKnown RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 RFWD3Q6PCD5 774 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 CCDC137Q6PK04 289 aaKnown RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 ZDHHC17Q8IUH5 632 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 GBP7Q8N8V2 638 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 SERPINB11Q96P15 392 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 ELAC2Q9BQ52 826 aaKnown RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 C11orf70Q9BRQ4 267 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 ROPN1BQ9BZX4 212 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 ROPN1Q9HAT0 212 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 ZDHHC4Q9NPG8 344 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 PRMT8Q9NR22 394 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 TAS2R14Q9NYV8 317 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 FBXO10Q9UK96 956 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 SUFUQ9UMX1 484 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 MUC6Q6W4X9 2439 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 MYO15AQ9UKN7 3530 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 DMDP11532 3685 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 SYNJ2BP-COX16A0A087WUM0 186 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 RIPK2O43353 540 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 LAMTOR5O43504 91 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 ACSL4O60488 711 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 ATP5DP30049 168 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 SNX16P57768 344 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 CSTF1Q05048 431 aaKnown RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 CRYMQ14894 314 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 TCEAL1Q15170 157 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 RAB6CQ53S08 254 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 ADGRF1Q5T601 910 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 FAM102AQ5T9C2 384 aaPredicted RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 TRIM72Q6ZMU5 477 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 MAMSTRQ6ZN01 415 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 SYNPOQ8N3V7 929 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 SPEM1Q8N4L4 309 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 PRELID2Q8N945 189 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 RPLP0P6Q8NHW5 317 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 DYDC1Q8WWB3 177 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 RSRC1Q96IZ7 334 aaKnown RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 NPY6RQ99463 290 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 RAB6CQ9H0N0 254 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 ARHGEF4Q9NR80 690 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 DNAJC17Q9NVM6 304 aaKnown RBP9.66□□□□□ -0.86
BRCA1-219ENST00000491747 COX16Q9P0S2 106 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 WDR35Q9P2L0 1181 aa9.66□□□□□ -0.86
BRCA1-219ENST00000491747 PRRT4C9JH25 899 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 MOCS2O96007 188 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-219ENST00000491747 NOS2P35228 1153 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 MATKP42679 507 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 KIR2DL1P43626 348 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-219ENST00000491747 ATXN1P54253 815 aaKnown RBP9.65□□□□□ -0.86
BRCA1-219ENST00000491747 DMWDQ09019 674 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 C2orf27AQ580R0 203 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 TNFAIP8L3Q5GJ75 292 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 NUGGCQ68CJ6 796 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 MON1BQ7L1V2 547 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 PHF13Q86YI8 300 aaPredicted RBP9.65□□□□□ -0.86
BRCA1-219ENST00000491747 UNC45BQ8IWX7 931 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 EMC1Q8N766 993 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 JOSD2Q8TAC2 188 aa9.65□□□□□ -0.86
BRCA1-219ENST00000491747 EPS8L3Q8TE67 593 aaKnown RBP9.65□□□□□ -0.86
BRCA1-219ENST00000491747 USP33Q8TEY7 942 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms