RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 KIF27Q86VH2 1401 aa4.34□□□□□ -1.71
PHC3-213ENST00000491258 WDR97A6NE52 1622 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 SYNJ1O43426 1573 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 PTPRGP23470 1445 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 SERINC4A6NH21 518 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 APOL1O14791 398 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 GRK5P34947 590 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 AVPR1AP37288 418 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 PPP3CCP48454 512 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 AMTP48728 403 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 ADPRHP54922 357 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 GFOD2Q3B7J2 385 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 CEP85LQ5SZL2 805 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 PALB2Q86YC2 1186 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 TXLNBQ8N3L3 684 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 TCP11L2Q8N4U5 519 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 GLIS1Q8NBF1 620 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 PKP4Q99569 1192 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 ACTR5Q9H9F9 607 aaPredicted RBP4.33□□□□□ -1.72
PHC3-213ENST00000491258 SLC12A4Q9UP95 1085 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 RAP2CQ9Y3L5 183 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 EID1Q9Y6B2 187 aa4.33□□□□□ -1.72
PHC3-213ENST00000491258 ERICH3Q5RHP9 1530 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 KIAA0586Q9BVV6 1533 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 A0A1W2PPC4 97 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 FAM234BA2RU67 622 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 LINC01553A4QN01 128 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 CER1O95813 267 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 RPL15P61313 204 aaKnown RBP4.32□□□□□ -1.72
PHC3-213ENST00000491258 ACSM2AQ08AH3 577 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 LCE1FQ5T754 118 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 ZNF449Q6P9G9 518 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 MYO1HQ8N1T3 1032 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 HORMAD2Q8N7B1 307 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 MIGA1Q8NAN2 632 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 REXO5Q96IC2 774 aaKnown RBP4.32□□□□□ -1.72
PHC3-213ENST00000491258 EPYCQ99645 322 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 KLHL31Q9H511 634 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 EPS8L2Q9H6S3 715 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 IGSF9Q9P2J2 1179 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 IL36RNQ9UBH0 155 aa4.32□□□□□ -1.72
PHC3-213ENST00000491258 TRPC5Q9UL62 973 aaPredicted RBP4.32□□□□□ -1.72
PHC3-213ENST00000491258 LOC105369274A0A096LPK9 316 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 LOC102723532A0A0G2JNH3 316 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 BMPR1BO00238 502 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 LDB2O43679 373 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 NAGAP17050 411 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 STT3AP46977 705 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 FOXL2P58012 376 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 RHAGQ02094 409 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 RBM39Q14498 530 aaKnown RBP4.31□□□□□ -1.72
PHC3-213ENST00000491258 ZNF284Q2VY69 593 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 HEPHL1Q6MZM0 1159 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 RETSATQ6NUM9 610 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 OR4N4Q8N0Y3 316 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 LILRB1Q8NHL6 650 aaPredicted RBP4.31□□□□□ -1.72
PHC3-213ENST00000491258 EIF2AQ9BY44 585 aaKnown RBP4.31□□□□□ -1.72
PHC3-213ENST00000491258 FRMD8Q9BZ67 464 aaPredicted RBP4.31□□□□□ -1.72
PHC3-213ENST00000491258 IL25Q9H293 177 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 HELLSQ9NRZ9 838 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 ARL15Q9NXU5 204 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 OBP2AQ9NY56 170 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 DTNAQ9Y4J8 743 aa4.31□□□□□ -1.72
PHC3-213ENST00000491258 TNIKQ9UKE5 1360 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 CYP3A7-CYP3A51PA0A087WV96 503 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 TCRBV7S3A2A0A539 114 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 SERPINB2P05120 415 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 DAOP14920 347 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 GNLYP22749 145 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 CYP3A7P24462 503 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 THPOP40225 353 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 CYP2J2P51589 502 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 ZBTB16Q05516 673 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 GRM4Q14833 912 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 FBXO38Q6PIJ6 1188 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 ANKS1BQ7Z6G8 1248 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 ADGRG7Q96K78 797 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 SORBS1Q9BX66 1292 aaKnown RBP4.3□□□□□ -1.72
PHC3-213ENST00000491258 TCEAL9Q9UHQ7 104 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 CA14Q9ULX7 337 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 TOP2BQ02880 1626 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 WDR81Q562E7 1941 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 CEP170Q5SW79 1584 aa4.3□□□□□ -1.72
PHC3-213ENST00000491258 ABCA5Q8WWZ7 1642 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 TBC1D3DA0A087WVF3 549 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 TBC1D3IA0A087WXS9 549 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 TBC1D3EA0A087X179 549 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 TBC1D3KA0A087X1G2 549 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 TBC1D3BA6NDS4 549 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 TBC1D3FA6NER0 549 aaPredicted RBP4.29□□□□□ -1.72
PHC3-213ENST00000491258 TBC1D3LB9A6J9 549 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 TSPAN6O43657 245 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 S100BP04271 92 aaPredicted RBP4.29□□□□□ -1.72
PHC3-213ENST00000491258 TBC1D3HP0C7X1 549 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 CASP5P51878 434 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 BNC1Q01954 994 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 SF3B4Q15427 424 aaKnown RBP eCLIP4.29□□□□□ -1.72
PHC3-213ENST00000491258 PLEKHG6Q3KR16 790 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 TBC1D3GQ6DHY5 549 aa4.29□□□□□ -1.72
PHC3-213ENST00000491258 HIST2H2BCQ6DN03 193 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms