RNA–Protein interactions for RNA: ENST00000490689.3

SHOX2-205, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 4,184 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-205ENST00000490689 CAMK1DQ8IU85 385 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 RELL1Q8IUW5 271 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 MIER2Q8N344 545 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 UBR7Q8N806 425 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 PCDH19Q8TAB3 1148 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 PPP1R13LQ8WUF5 828 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 NDRG1Q92597 394 aaKnown RBP13.05□□□□□ -0.32
SHOX2-205ENST00000490689 P2RY11Q96G91 374 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 AGAP2Q99490 1192 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 OSBPL11Q9BXB4 747 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 SDCBP2Q9H190 292 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 RMI1Q9H9A7 625 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 UTP6Q9NYH9 597 aaKnown RBP13.05□□□□□ -0.32
SHOX2-205ENST00000490689 HACD3Q9P035 362 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 LRP6O75581 1613 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 HPCAP84074 193 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 ADGRE1Q14246 886 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 TLR1Q15399 786 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 FRA10AC1Q70Z53 315 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 PYROXD2Q8N2H3 581 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 ACTRT2Q8TDY3 377 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 AKT1S1Q96B36 256 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 PKP2Q99959 881 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 NDEL1Q9GZM8 345 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 DEFB129Q9H1M3 183 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 STN1Q9H668 368 aaKnown RBP13.05□□□□□ -0.32
SHOX2-205ENST00000490689 NOL6Q9H6R4 1146 aaKnown RBP13.05□□□□□ -0.32
SHOX2-205ENST00000490689 VTI1BQ9UEU0 232 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 RAB26Q9ULW5 256 aa13.05□□□□□ -0.32
SHOX2-205ENST00000490689 KRT8P05787 483 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 NEK2P51955 445 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 PAOXQ6QHF9 649 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 C17orf80Q9BSJ5 609 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 SPON2Q9BUD6 331 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 CDHR5Q9HBB8 845 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 GRIN3BO60391 1043 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 DNAJA2O60884 412 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 ZBTB11O95625 1053 aaPredicted RBP13.04□□□□□ -0.32
SHOX2-205ENST00000490689 LSAMPQ13449 338 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 RGS21Q2M5E4 152 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 CCDC103Q8IW40 242 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 ANKLE1Q8NAG6 615 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 BPIFB6Q8NFQ5 453 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 SLC2A14Q8TDB8 520 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 WDCPQ9H6R7 721 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 POPDC2Q9HBU9 364 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 KIF17Q9P2E2 1029 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 CPSF3Q9UKF6 684 aaKnown RBP13.04□□□□□ -0.32
SHOX2-205ENST00000490689 M0QZ92 97 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 LDLRP01130 860 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 NR2C2P49116 596 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 OLIG2Q13516 323 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 TTLL4Q14679 1199 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 TNFAIP8L3Q5GJ75 292 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 IL23RQ5VWK5 629 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 DNAJC14Q6Y2X3 702 aaPredicted RBP13.04□□□□□ -0.32
SHOX2-205ENST00000490689 CBR4Q8N4T8 237 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 SLC25A23Q9BV35 468 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 ELOVL4Q9GZR5 314 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 SMARCAD1Q9H4L7 1026 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 CYP3A43Q9HB55 503 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 SP110Q9HB58 689 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 SPAG4Q9NPE6 437 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 FETUBQ9UGM5 382 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 TMA7Q9Y2S6 64 aaKnown RBP13.04□□□□□ -0.32
SHOX2-205ENST00000490689 ASB3Q9Y575 518 aa13.04□□□□□ -0.32
SHOX2-205ENST00000490689 YDJCA8MPS7 323 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 DHX15O43143 795 aaKnown RBP13.03□□□□□ -0.32
SHOX2-205ENST00000490689 PABPC4LP0CB38 370 aaKnown RBP13.03□□□□□ -0.32
SHOX2-205ENST00000490689 IMPG1Q17R60 797 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 AASDHQ4L235 1098 aaPredicted RBP13.03□□□□□ -0.32
SHOX2-205ENST00000490689 EGFLAMQ63HQ2 1017 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 SCIMPQ6UWF3 145 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 RMDN1Q96DB5 314 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 OTUD5Q96G74 571 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 KCTD14Q9BQ13 255 aaPredicted RBP13.03□□□□□ -0.32
SHOX2-205ENST00000490689 CHRAC1Q9NRG0 131 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 NSMCE4AQ9NXX6 385 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 DNAJB4Q9UDY4 337 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 HMGXB4Q9UGU5 601 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 NDUFAF1Q9Y375 327 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 FAM95CA0A1B0GW59 222 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 RFPL1O75677 317 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 SNRPB2P08579 225 aaKnown RBP13.03□□□□□ -0.32
SHOX2-205ENST00000490689 AOC1P19801 751 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 CDH3P22223 829 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 GSSP48637 474 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 PGGT1BP53609 377 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 TSPAN17Q96FV3 270 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 DHX33Q9H6R0 707 aaKnown RBP13.03□□□□□ -0.32
SHOX2-205ENST00000490689 CXorf21Q9HAI6 301 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 KIAA1257Q9ULG3 409 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 PSAT1Q9Y617 370 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 E5RI56 91 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 ACKR2O00590 384 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 PFDN6O15212 129 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 PEX10O60683 326 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 MAGP20916 626 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 CA8P35219 290 aa13.03□□□□□ -0.32
SHOX2-205ENST00000490689 CCR10P46092 362 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms