RNA–Protein interactions for RNA: ENST00000490476.1

SSX2IP-208, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 3

Gene SSX2IP, Length 716 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-208ENST00000490476 RTL9Q8NET4 1388 aa5.4□□□□□ -1.55
SSX2IP-208ENST00000490476 EDC4Q6P2E9 1401 aaKnown RBP5.4□□□□□ -1.55
SSX2IP-208ENST00000490476 STX16-NPEPL1H3BU86 382 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 M0QYT0 321 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 STX16O14662 325 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 YY2O15391 372 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 CBFA2T3O75081 653 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 ATP1A3P13637 1013 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 CREB1P16220 341 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 THBS4P35443 961 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 NXPH1P58417 271 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 UBE3AQ05086 875 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 MTAPQ13126 283 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 SEMA3BQ13214 749 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 CLCA4Q14CN2 919 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 TRIM60Q495X7 471 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 CCDC144NLQ6NUI1 221 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 RAB11FIP4Q86YS3 637 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 LRRC71Q8N4P6 559 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 SPATA18Q8TC71 538 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 SOCS4Q8WXH5 440 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 ASB10Q8WXI3 467 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 SDCCAG3Q96C92 435 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 HVCN1Q96D96 273 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 MYEOVQ96EZ4 313 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 REXO5Q96IC2 774 aaKnown RBP5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 VPS50Q96JG6 964 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 PLEKHG4BQ96PX9 1271 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 DBNDD1Q9H9R9 158 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 UBN1Q9NPG3 1134 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 LIN7CQ9NUP9 197 aaKnown RBP5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 DERAQ9Y315 318 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 ABCC12Q96J65 1359 aa5.39□□□□□ -1.55
SSX2IP-208ENST00000490476 AP4M1O00189 453 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 KIAA0355O15063 1070 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 HOXC11O43248 304 aaPredicted RBP5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 HSP90AB1P08238 724 aaKnown RBP5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 IL6RP08887 468 aaPredicted RBP5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 NR2F6P10588 404 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 CPA1P15085 419 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 IL9P15248 144 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 KRT9P35527 623 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 LIFRP42702 1097 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 VCPP55072 806 aaKnown RBP5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 MAPK7Q13164 816 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 LRRC24Q50LG9 513 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 SPDYAQ5MJ70 313 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 GRHL2Q6ISB3 625 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 VWA1Q6PCB0 445 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 HTRA1Q92743 480 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 OPTNQ96CV9 577 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 WDYHV1Q96HA8 205 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 AIFM2Q9BRQ8 373 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 TWSG1Q9GZX9 223 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 NRDE2Q9H7Z3 1164 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 RMI1Q9H9A7 625 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 NOD2Q9HC29 1040 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 ZCCHC17Q9NP64 241 aaKnown RBP5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 MYOZ2Q9NPC6 264 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 G6PC2Q9NQR9 355 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 SMPD4Q9NXE4 827 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 SLC13A4Q9UKG4 626 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 BAG5Q9UL15 447 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 RAB21Q9UL25 225 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 NFU1Q9UMS0 254 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 VPS4AQ9UN37 437 aa5.38□□□□□ -1.55
SSX2IP-208ENST00000490476 CENPVL1A0A0U1RR11 272 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 TMEM200CA6NKL6 621 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 VWC2LB2RUY7 222 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 CES2O00748 559 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 CTIFO43310 598 aaKnown RBP5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 SPRY2O43597 315 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 PEX1O43933 1283 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 PMPCBO75439 489 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 LARGE1O95461 756 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 CD4P01730 458 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 C1SP09871 688 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 ELF1P32519 619 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 CCR5P51681 352 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 TPTEP56180 551 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 MPP1Q00013 466 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 E2F1Q01094 437 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 TLE2Q04725 743 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 EFR3AQ14156 821 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 SMAD1Q15797 465 aaKnown RBP5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 AASDHQ4L235 1098 aaPredicted RBP5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 ZNF618Q5T7W0 954 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 TEDDM1Q5T9Z0 273 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 DGAT2L7PQ6IED9 249 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 FAM180BQ6P0A1 224 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 TFAP2BQ92481 460 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 STAMQ92783 540 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 RRP36Q96EU6 259 aaKnown RBP5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 PRR11Q96HE9 360 aaPredicted RBP5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 PGBD1Q96JS3 809 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 Q96MF0 132 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 TWNKQ96RR1 684 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 PRR25Q96S07 402 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 KLC4Q9NSK0 619 aa5.37□□□□□ -1.55
SSX2IP-208ENST00000490476 IRAK4Q9NWZ3 460 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms