RNA–Protein interactions for RNA: ENST00000490332.2

PTPRK-213, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 612 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-213ENST00000490332 ITGB1P05556 798 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 ATP5BP06576 529 aaKnown RBP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 NFICP08651 508 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 LINC00271P0C7V0 271 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 TROVE2P10155 538 aaKnown RBP eCLIP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 EZRP15311 586 aaKnown RBP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 ARF4P18085 180 aaPredicted RBP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 TAC1P20366 129 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CYP3A5P20815 502 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CA4P22748 312 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 PAX3P23760 479 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CNTFP26441 200 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 MAGEA6P43360 314 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 PTPN9P43378 593 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CCR10P46092 362 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 ATP5OP48047 213 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 RPL34P49207 117 aaKnown RBP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 SERPINB9P50453 376 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 GTF2A1P52655 376 aaPredicted RBP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 ZNF135P52742 658 aaPredicted RBP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 NDST1P52848 882 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CDH8P55286 799 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 SLC8A3P57103 927 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 IGBP1P78318 339 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CDK16Q00536 496 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CSTF1Q05048 431 aaKnown RBP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 UBE3AQ05086 875 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 SFSWAPQ12872 951 aaKnown RBP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 BNIP1Q12981 228 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 DNAJC3Q13217 504 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 NOMO1Q15155 1222 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 DUSP6Q16828 381 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 PARP6Q2NL67 630 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 EFHC1Q5JVL4 640 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 FBXW10Q5XX13 1052 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 PSAPL1Q6NUJ1 521 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 LLGL2Q6P1M3 1020 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CYB5D1Q6P9G0 228 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 SLC27A1Q6PCB7 646 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 SYCE2Q6PIF2 218 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 SCARA5Q6ZMJ2 495 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 PDZD4Q76G19 769 aaPredicted RBP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 HACE1Q8IYU2 909 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CRYBG2Q8N1P7 616 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 AGGF1Q8N302 714 aaeCLIP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 NME8Q8N427 588 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 ANKRD52Q8NB46 1076 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 DBF4BQ8NFT6 615 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CFAP61Q8NHU2 1237 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 JOSD2Q8TAC2 188 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CXorf38Q8TB03 319 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 SPPL3Q8TCT6 385 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 MGARPQ8TDB4 240 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 POF1BQ8WVV4 589 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CPT1BQ92523 772 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 SEPT8Q92599 483 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CASP10Q92851 521 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 RTP4Q96DX8 246 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 MTBPQ96DY7 904 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 ANKRD27Q96NW4 1050 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CPXM1Q96SM3 734 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 ZNF670Q9BS34 389 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 DHRS4Q9BTZ2 278 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 KRTAP4-2Q9BYR5 136 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 MINDY3Q9H8M7 445 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 SAR1AQ9NR31 198 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 METTL5Q9NRN9 209 aaKnown RBP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 FGFR1OP2Q9NVK5 253 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 SPATA6Q9NWH7 488 aaPredicted RBP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 RCOR3Q9P2K3 495 aaPredicted RBP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 TBK1Q9UHD2 729 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 PCSK1NQ9UHG2 260 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 ZNF180Q9UJW8 692 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 UBQLN1Q9UMX0 589 aaKnown RBP5.21□□□□□ -1.58
PTPRK-213ENST00000490332 DOLKQ9UPQ8 538 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 MSRB2Q9Y3D2 182 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 DOPEY2Q9Y3R5 2298 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 TICRRQ7Z2Z1 1910 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 CLUHO75153 1309 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 NRCAMQ92823 1304 aa5.21□□□□□ -1.58
PTPRK-213ENST00000490332 PTPRQQ9UMZ3 2332 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 NBPF19A0A087WUL8 3843 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 URB1O60287 2271 aaKnown RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 A6NJR5 290 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 CDK2AP1O14519 115 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 TYROBPO43914 113 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 TSPAN1O60635 241 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 EDF1O60869 148 aaKnown RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 GCATO75600 419 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 EOMESO95936 686 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 RPLP2P05387 115 aaKnown RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 INHBAP08476 426 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 SNRPAP09012 282 aaKnown RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 ZSCAN5DPP0CG00 497 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 GNAT1P11488 350 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 MLNP12872 115 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 ETS1P14921 441 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 NQO1P15559 274 aaKnown RBP5.2□□□□□ -1.58
PTPRK-213ENST00000490332 TPSB2P20231 275 aa5.2□□□□□ -1.58
PTPRK-213ENST00000490332 CCND1P24385 295 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms