RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101		Q6ZNB5	142 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	PRR23C	Q6ZRP0	262 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	HTR3D	Q70Z44	454 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	DDX42	Q86XP3	938 aa	Known RBP eCLIP	18.64	■□□□□ 0.57
SRM-206	ENST00000490101	KLHL7	Q8IXQ5	586 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	SLC35B2	Q8TB61	432 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	ACTL9	Q8TC94	416 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	ATG4A	Q8WYN0	398 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	ATP2A3	Q93084	1043 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	WBP2	Q969T9	261 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	RUNDC3B	Q96NL0	473 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	KRT12	Q99456	494 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	DDX50	Q9BQ39	737 aa	Known RBP	18.64	■□□□□ 0.57
SRM-206	ENST00000490101	RTKN	Q9BST9	563 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	DDX47	Q9H0S4	455 aa	Known RBP	18.64	■□□□□ 0.57
SRM-206	ENST00000490101	ETNK2	Q9NVF9	386 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	PPARGC1A	Q9UBK2	798 aa	Known RBP	18.64	■□□□□ 0.57
SRM-206	ENST00000490101	RALGAPA1	Q6GYQ0	2036 aa		18.64	■□□□□ 0.57
SRM-206	ENST00000490101	WASH4P	A8MWX3	477 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	AXIN1	O15169	862 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	LIAS	O43766	372 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	RPP40	O75818	363 aa	Known RBP	18.63	■□□□□ 0.57
SRM-206	ENST00000490101	IRF1	P10914	325 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	PECAM1	P16284	738 aa	Predicted RBP	18.63	■□□□□ 0.57
SRM-206	ENST00000490101	TACR2	P21452	398 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	NR2C2	P49116	596 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	OTUD4	Q01804	1114 aa	Known RBP	18.63	■□□□□ 0.57
SRM-206	ENST00000490101	NOMO1	Q15155	1222 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	CSRP2	Q16527	193 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	EML3	Q32P44	896 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	C5orf22	Q49AR2	442 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	GLE1	Q53GS7	698 aa	Known RBP	18.63	■□□□□ 0.57
SRM-206	ENST00000490101	FAM133B	Q5BKY9	247 aa	Known RBP	18.63	■□□□□ 0.57
SRM-206	ENST00000490101	ADGRF1	Q5T601	910 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	RAP1GAP2	Q684P5	730 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	NCBP2-AS2	Q69YL0	99 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	FBXL22	Q6P050	247 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	TTC27	Q6P3X3	843 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	CHSY1	Q86X52	802 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	DENND1C	Q8IV53	801 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	RPLP0P6	Q8NHW5	317 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	GAB3	Q8WWW8	586 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	P3H4	Q92791	437 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	EXOC4	Q96A65	974 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	HHIP	Q96QV1	700 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	LINC00597	Q9H2U6	94 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	CATSPERB	Q9H7T0	1116 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	SAE1	Q9UBE0	346 aa	Predicted RBP	18.63	■□□□□ 0.57
SRM-206	ENST00000490101	PCYOX1	Q9UHG3	505 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	LSM7	Q9UK45	103 aa	Known RBP	18.63	■□□□□ 0.57
SRM-206	ENST00000490101	AGO1	Q9UL18	857 aa	Known RBP	18.63	■□□□□ 0.57
SRM-206	ENST00000490101	DRG1	Q9Y295	367 aa	Known RBP	18.63	■□□□□ 0.57
SRM-206	ENST00000490101	ZNF510	Q9Y2H8	683 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	EPG5	Q9HCE0	2579 aa		18.63	■□□□□ 0.57
SRM-206	ENST00000490101	GOLGA6L7	A0A1B0GV03	622 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	CTIF	O43310	598 aa	Known RBP	18.62	■□□□□ 0.57
SRM-206	ENST00000490101	GDF9	O60383	454 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	TCF3	P15923	654 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	TERF1	P54274	439 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	CCDC6	Q16204	474 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	TEX35	Q5T0J7	233 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	RWDD4	Q6NW29	188 aa	Known RBP	18.62	■□□□□ 0.57
SRM-206	ENST00000490101	TMCO3	Q6UWJ1	677 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	NPNT	Q6UXI9	565 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	CCDC26	Q8TAB7	109 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	NETO1	Q8TDF5	533 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	UBXN4	Q92575	508 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	HAUS1	Q96CS2	278 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	RETREG1	Q9H6L5	497 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	CFAP97	Q9P2B7	532 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	FEZ2	Q9UHY8	353 aa	Predicted RBP	18.62	■□□□□ 0.57
SRM-206	ENST00000490101	VANGL2	Q9ULK5	521 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	RAD54B	Q9Y620	910 aa		18.62	■□□□□ 0.57
SRM-206	ENST00000490101	HELZ	P42694	1942 aa	Known RBP	18.62	■□□□□ 0.57
SRM-206	ENST00000490101	TPR	P12270	2363 aa	Known RBP	18.61	■□□□□ 0.57
SRM-206	ENST00000490101	E2F8	A0AVK6	867 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101		F5H5T6	163 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	LEFTY2	O00292	366 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	RHOQ	P17081	205 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	GBE1	Q04446	702 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	NR1H3	Q13133	447 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	SNX1	Q13596	522 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	BYSL	Q13895	437 aa	Known RBP	18.61	■□□□□ 0.57
SRM-206	ENST00000490101	DHX34	Q14147	1143 aa	Known RBP	18.61	■□□□□ 0.57
SRM-206	ENST00000490101	OASL	Q15646	514 aa	Known RBP	18.61	■□□□□ 0.57
SRM-206	ENST00000490101	CCDC70	Q6NSX1	233 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	CCDC137	Q6PK04	289 aa	Known RBP	18.61	■□□□□ 0.57
SRM-206	ENST00000490101	BZW1	Q7L1Q6	419 aa	Known RBP	18.61	■□□□□ 0.57
SRM-206	ENST00000490101	MAATS1	Q7Z4T9	603 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	KBTBD6	Q86V97	674 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	FAM217A	Q8IXS0	508 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	RTL3	Q8N8U3	475 aa	Known RBP	18.61	■□□□□ 0.57
SRM-206	ENST00000490101	ATL2	Q8NHH9	583 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	EZH1	Q92800	747 aa	Predicted RBP	18.61	■□□□□ 0.57
SRM-206	ENST00000490101	SLCO2A1	Q92959	643 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	LRRC1	Q9BTT6	524 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	ZYG11B	Q9C0D3	744 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	ARRDC1-AS1	Q9H2J1	176 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	DONSON	Q9NYP3	566 aa		18.61	■□□□□ 0.57
SRM-206	ENST00000490101	DTL	Q9NZJ0	730 aa		18.61	■□□□□ 0.57

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms