RNA–Protein interactions for RNA: ENST00000489758.1

CLIC4-203, Transcript of chloride intracellular channel 4, humanhuman

TSL 2

Gene CLIC4, Length 439 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4-203ENST00000489758 SEL1L2Q5TEA6 688 aa16.46■□□□□ 0.23
CLIC4-203ENST00000489758 EMC10Q5UCC4 262 aa16.46■□□□□ 0.23
CLIC4-203ENST00000489758 IL31Q6EBC2 164 aa16.46■□□□□ 0.23
CLIC4-203ENST00000489758 SLC13A5Q86YT5 568 aaPredicted RBP16.46■□□□□ 0.23
CLIC4-203ENST00000489758 PBKQ96KB5 322 aa16.46■□□□□ 0.23
CLIC4-203ENST00000489758 MRGPRX3Q96LB0 322 aa16.46■□□□□ 0.23
CLIC4-203ENST00000489758 NELL2Q99435 816 aa16.46■□□□□ 0.23
CLIC4-203ENST00000489758 SPON2Q9BUD6 331 aa16.46■□□□□ 0.23
CLIC4-203ENST00000489758 C2orf49Q9BVC5 232 aaPredicted RBP16.46■□□□□ 0.23
CLIC4-203ENST00000489758 CIPCQ9C0C6 399 aa16.46■□□□□ 0.23
CLIC4-203ENST00000489758 PDFQ9HBH1 243 aa16.46■□□□□ 0.23
CLIC4-203ENST00000489758 RBM12Q9NTZ6 932 aaKnown RBP16.46■□□□□ 0.23
CLIC4-203ENST00000489758 MRPS17Q9Y2R5 130 aaKnown RBP16.46■□□□□ 0.23
CLIC4-203ENST00000489758 HEY1Q9Y5J3 304 aa16.46■□□□□ 0.23
CLIC4-203ENST00000489758 ARHGAP42A6NI28 874 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 FAM170BA6NMN3 283 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 APOC4-APOC2K7ER74 178 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 CBX4O00257 560 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 CEP104O60308 925 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 MAFKO60675 156 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 CD160O95971 181 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 PDGFBP01127 241 aaPredicted RBP16.45■□□□□ 0.22
CLIC4-203ENST00000489758 APOC2P02655 101 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 DLDP09622 509 aaKnown RBP16.45■□□□□ 0.22
CLIC4-203ENST00000489758 GARSP41250 739 aaKnown RBP16.45■□□□□ 0.22
CLIC4-203ENST00000489758 NR2C2P49116 596 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 NUDT18Q6ZVK8 323 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 CCDC105Q8IYK2 499 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 PJA1Q8NG27 643 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 CYB5D2Q8WUJ1 264 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 ACDQ96AP0 544 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 HAUS1Q96CS2 278 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 MYO19Q96H55 970 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 C11orf16Q9NQ32 467 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 TTC7AQ9ULT0 858 aaPredicted RBP16.45■□□□□ 0.22
CLIC4-203ENST00000489758 RAD54BQ9Y620 910 aa16.45■□□□□ 0.22
CLIC4-203ENST00000489758 CXorf51AA0A1B0GTR3 108 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 TMEM221A6NGB7 291 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 J3KR12 359 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 M0R296 226 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 ZNF185O15231 689 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 PRAMEF11O60813 436 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 PEX11BO96011 259 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 MT-CO1P00395 513 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 FGGP02679 453 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 ASLP04424 464 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 HNRNPLP14866 589 aaKnown RBP eCLIP16.44■□□□□ 0.22
CLIC4-203ENST00000489758 TCP1P17987 556 aaKnown RBP16.44■□□□□ 0.22
CLIC4-203ENST00000489758 CASQ1P31415 396 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 VASPP50552 380 aaPredicted RBP16.44■□□□□ 0.22
CLIC4-203ENST00000489758 SEC13P55735 322 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 ECT2LQ008S8 904 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 SULT2A1Q06520 285 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 UBXN2BQ14CS0 331 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 SIX1Q15475 284 aaPredicted RBP16.44■□□□□ 0.22
CLIC4-203ENST00000489758 FBXO43Q4G163 708 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 DGKKQ5KSL6 1271 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 EGFLAMQ63HQ2 1017 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 CWF19L1Q69YN2 538 aaKnown RBP16.44■□□□□ 0.22
CLIC4-203ENST00000489758 LINGO4Q6UY18 593 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 LRRC49Q8IUZ0 686 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 KCNV2Q8TDN2 545 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 USP33Q8TEY7 942 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 LRRN4Q8WUT4 740 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 P3H4Q92791 437 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 MS4A14Q96JA4 679 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 TSGA13Q96PP4 275 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 OSBPL6Q9BZF3 934 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 THAP10Q9P2Z0 257 aaPredicted RBP16.44■□□□□ 0.22
CLIC4-203ENST00000489758 IPO11Q9UI26 975 aaKnown RBP16.44■□□□□ 0.22
CLIC4-203ENST00000489758 ERVW-1Q9UQF0 538 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 HS3ST2Q9Y278 367 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 R3HDM2Q9Y2K5 976 aaKnown RBP16.44■□□□□ 0.22
CLIC4-203ENST00000489758 ACTL7AQ9Y615 435 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 BDP1A6H8Y1 2624 aa16.44■□□□□ 0.22
CLIC4-203ENST00000489758 K7ERQ8 282 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 NCAM2O15394 837 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 RNF40O75150 1001 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 ATP5BP06576 529 aaKnown RBP16.43■□□□□ 0.22
CLIC4-203ENST00000489758 SRPRAP08240 638 aaKnown RBP16.43■□□□□ 0.22
CLIC4-203ENST00000489758 MX2P20592 715 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 STK19P49842 368 aaPredicted RBP16.43■□□□□ 0.22
CLIC4-203ENST00000489758 OTUD4Q01804 1114 aaKnown RBP16.43■□□□□ 0.22
CLIC4-203ENST00000489758 IL10RBQ08334 325 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 ENPP2Q13822 863 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 NOMO1Q15155 1222 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 LEKR1Q6ZMV7 388 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 Q6ZS52 159 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 ATPAF2Q8N5M1 289 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 KDM1BQ8NB78 822 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 ACTL9Q8TC94 416 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 CLDN23Q96B33 292 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 HDAC11Q96DB2 347 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 RPL10LQ96L21 214 aaKnown RBP16.43■□□□□ 0.22
CLIC4-203ENST00000489758 ACOX2Q99424 681 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 LGMNQ99538 433 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 LMAN1LQ9HAT1 526 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 ZDHHC4Q9NPG8 344 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 SLCO3A1Q9UIG8 710 aa16.43■□□□□ 0.22
CLIC4-203ENST00000489758 HPCAL4Q9UM19 191 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms