RNA–Protein interactions for RNA: ENST00000489318.1

C9orf3-220, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 682 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-220ENST00000489318 RARS2Q5T160 578 aaKnown RBP11.74□□□□□ -0.53
C9orf3-220ENST00000489318 ITPRIPL1Q6GPH6 555 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 HDXQ7Z353 690 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 CFAP52Q8N1V2 620 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 TEX26Q8N6G2 289 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 CNTD1Q8N815 330 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 TDRD5Q8NAT2 981 aaKnown RBP11.74□□□□□ -0.53
C9orf3-220ENST00000489318 MCUQ8NE86 351 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 OR52K2Q8NGK3 314 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 ZSWIM3Q96MP5 696 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 ZNF599Q96NL3 588 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 ACE2Q9BYF1 805 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-220ENST00000489318 SMG9Q9H0W8 520 aaKnown RBP11.74□□□□□ -0.53
C9orf3-220ENST00000489318 TTYH1Q9H313 450 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-220ENST00000489318 TRPV4Q9HBA0 871 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 ETNK1Q9HBU6 452 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 RAB6BQ9NRW1 208 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 OBP2AQ9NY56 170 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 MARK1Q9P0L2 795 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 KLHL8Q9P2G9 620 aaPredicted RBP11.74□□□□□ -0.53
C9orf3-220ENST00000489318 TBC1D14Q9P2M4 693 aa11.74□□□□□ -0.53
C9orf3-220ENST00000489318 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.73□□□□□ -0.53
C9orf3-220ENST00000489318 TCRBV7S3A2A0A539 114 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 ERI2A8K979 691 aaKnown RBP11.73□□□□□ -0.53
C9orf3-220ENST00000489318 TRDMT1O14717 391 aaKnown RBP11.73□□□□□ -0.53
C9orf3-220ENST00000489318 PENKP01210 267 aaPredicted RBP11.73□□□□□ -0.53
C9orf3-220ENST00000489318 RHOCP08134 193 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 CCNB1P14635 433 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 FSHRP23945 695 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 MAGEA3P43357 314 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 CDK16Q00536 496 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 DHX9Q08211 1270 aaKnown RBP11.73□□□□□ -0.53
C9orf3-220ENST00000489318 ZNF177Q13360 481 aaPredicted RBP11.73□□□□□ -0.53
C9orf3-220ENST00000489318 UAP1Q16222 522 aaPredicted RBP11.73□□□□□ -0.53
C9orf3-220ENST00000489318 FYB2Q5VWT5 728 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 ALG1LQ6GMV1 187 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 PPP1R21Q6ZMI0 780 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 ZNF534Q76KX8 674 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 ARID3BQ8IVW6 561 aaPredicted RBP11.73□□□□□ -0.53
C9orf3-220ENST00000489318 CELF5Q8N6W0 485 aaKnown RBP11.73□□□□□ -0.53
C9orf3-220ENST00000489318 TSEN2Q8NCE0 465 aaKnown RBP11.73□□□□□ -0.53
C9orf3-220ENST00000489318 ING5Q8WYH8 240 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 MYO18AQ92614 2054 aaKnown RBP11.73□□□□□ -0.53
C9orf3-220ENST00000489318 TMA16Q96EY4 203 aaKnown RBP11.73□□□□□ -0.53
C9orf3-220ENST00000489318 GDAP1L1Q96MZ0 367 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 PPP1R2P1Q96PQ5 205 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 EPB41L4BQ9H329 900 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 SP110Q9HB58 689 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 GDE1Q9NZC3 331 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 CLEC1BQ9P126 229 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 HPCAL4Q9UM19 191 aa11.73□□□□□ -0.53
C9orf3-220ENST00000489318 MIA3Q5JRA6 1907 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 A0A0D9SEW6 157 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 SCAMP3O14828 347 aaKnown RBP11.72□□□□□ -0.53
C9orf3-220ENST00000489318 ZBTB24O43167 697 aaPredicted RBP11.72□□□□□ -0.53
C9orf3-220ENST00000489318 KDELR3O43731 214 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 TSPAN3O60637 253 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 TBL1XO60907 577 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 TBX10O75333 385 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 SUN1O94901 812 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 HLA-DQB2P05538 268 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 NFKB1P19838 968 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 PSMB4P28070 264 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 ACVRL1P37023 503 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 TNNT3P45378 269 aaPredicted RBP11.72□□□□□ -0.53
C9orf3-220ENST00000489318 HIF1AQ16665 826 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 TMCO4Q5TGY1 634 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 KCTD11Q693B1 232 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 TRMT10CQ7L0Y3 403 aaKnown RBP11.72□□□□□ -0.53
C9orf3-220ENST00000489318 PID1Q7Z2X4 250 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 ZNF557Q8N988 423 aaPredicted RBP11.72□□□□□ -0.53
C9orf3-220ENST00000489318 FGF13Q92913 245 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 ALG14Q96F25 216 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 LMLNQ96KR4 655 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 ASB16Q96NS5 453 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 SERPINB12Q96P63 405 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 FCRL5Q96RD9 977 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 RBM15Q96T37 977 aaKnown RBP eCLIP11.72□□□□□ -0.53
C9orf3-220ENST00000489318 CEP41Q9BYV8 373 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 S1PR5Q9H228 398 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 PABPC3Q9H361 631 aaKnown RBP11.72□□□□□ -0.53
C9orf3-220ENST00000489318 CDC42EP4Q9H3Q1 356 aaKnown RBP11.72□□□□□ -0.53
C9orf3-220ENST00000489318 IGFLR1Q9H665 355 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 SEPT10Q9P0V9 454 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 RSPH14Q9UHP6 348 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 ATP8A1Q9Y2Q0 1164 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 OR51B4Q9Y5P0 310 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 MTCH2Q9Y6C9 303 aa11.72□□□□□ -0.53
C9orf3-220ENST00000489318 MUC22E2RYF6 1773 aaPredicted RBP11.72□□□□□ -0.53
C9orf3-220ENST00000489318 MYLKQ15746 1914 aa11.71□□□□□ -0.53
C9orf3-220ENST00000489318 J3KR12 359 aa11.71□□□□□ -0.53
C9orf3-220ENST00000489318 SLC9A3R1O14745 358 aaPredicted RBP11.71□□□□□ -0.53
C9orf3-220ENST00000489318 ZMPSTE24O75844 475 aa11.71□□□□□ -0.53
C9orf3-220ENST00000489318 AP2A1O95782 977 aa11.71□□□□□ -0.53
C9orf3-220ENST00000489318 JCHAINP01591 159 aa11.71□□□□□ -0.53
C9orf3-220ENST00000489318 APRTP07741 180 aa11.71□□□□□ -0.53
C9orf3-220ENST00000489318 NUDT17P0C025 328 aa11.71□□□□□ -0.53
C9orf3-220ENST00000489318 MLNP12872 115 aa11.71□□□□□ -0.53
C9orf3-220ENST00000489318 FCARP24071 287 aa11.71□□□□□ -0.53
C9orf3-220ENST00000489318 HSD17B3P37058 310 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms