RNA–Protein interactions for RNA: ENST00000488753.1

ATPAF2-207, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-207ENST00000488753 CCNI2Q6ZMN8 369 aaPredicted RBP13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 RBM43Q6ZSC3 357 aaKnown RBP13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 SLCO6A1Q86UG4 719 aa13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 DCAF4L2Q8NA75 395 aa13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 CCDC114Q96M63 670 aa13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 HAPLN3Q96S86 360 aa13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 TBCBQ99426 244 aa13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 ELF4Q99607 663 aaPredicted RBP13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 EBF2Q9HAK2 575 aa13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 ANLNQ9NQW6 1124 aa13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 AASDHPPTQ9NRN7 309 aa13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 LMBRD1Q9NUN5 540 aa13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 TOR4AQ9NXH8 423 aa13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 DMTF1Q9Y222 760 aa13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 BTBD3Q9Y2F9 522 aa13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 FARP1Q9Y4F1 1045 aaPredicted RBP13.41□□□□□ -0.26
ATPAF2-207ENST00000488753 TBC1D3DA0A087WVF3 549 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 TBC1D3IA0A087WXS9 549 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 TBC1D3EA0A087X179 549 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 TBC1D3KA0A087X1G2 549 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 TBC1D3FA6NER0 549 aaPredicted RBP13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 TBC1D3LB9A6J9 549 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 PLRG1O43660 514 aaKnown RBP13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 CNTN5O94779 1100 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 MMEP08473 750 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 TBC1D3HP0C7X1 549 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 CCDC15Q0P6D6 951 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 OVGP1Q12889 678 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 ALFQ53S48 1182 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 TBC1D3GQ6DHY5 549 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 TBC1D3CQ6IPX1 549 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 NAPEPLDQ6IQ20 393 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 ZNF783Q6ZMS7 281 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 Q6ZVU0 165 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 PRPF39Q86UA1 669 aaKnown RBP13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 IQCHQ86VS3 1027 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 TRIM69Q86WT6 500 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 TBC1D3Q8IZP1 549 aaPredicted RBP13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 PNPLA1Q8N8W4 532 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 PIP4K2CQ8TBX8 421 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 CPA5Q8WXQ8 436 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 SERAC1Q96JX3 654 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 PSMB7Q99436 277 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 GANQ9H2C0 597 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 ERVMER34-1Q9H9K5 563 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 GDF3Q9NR23 364 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 TAB2Q9NYJ8 693 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 VPS51Q9UID3 782 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 NOCTQ9UK39 431 aaKnown RBP13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 SARDHQ9UL12 918 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 FREM2Q5SZK8 3169 aa13.4□□□□□ -0.26
ATPAF2-207ENST00000488753 CABIN1Q9Y6J0 2220 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 CXorf51AA0A1B0GTR3 108 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 ILVBLA1L0T0 632 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 E9PAM4 449 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 KCNK3O14649 394 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 MAGEC1O60732 1142 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 RTN2O75298 545 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 ENDOD1O94919 500 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 WNT1P04628 370 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 CYP1A1P04798 512 aaPredicted RBP13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 ATXN1LP0C7T5 689 aaKnown RBP13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 SRCP12931 536 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 ZNF18P17022 549 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 MMP8P22894 467 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 OR1E1P30953 314 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 ARRB1P49407 418 aaPredicted RBP13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 NUMBP49757 651 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 METAP1P53582 386 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 PPP2CBP62714 309 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 PPP2CAP67775 309 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 CDR2Q01850 454 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 KRT31Q15323 416 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 FKBP15Q5T1M5 1219 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 AGBL4Q5VU57 503 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 NAA35Q5VZE5 725 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 TRNP1Q6NT89 227 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 NEK5Q6P3R8 708 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 TRIM72Q6ZMU5 477 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 TMPRSS7Q7RTY8 843 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 GALNT15Q8N3T1 639 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 OXR1Q8N573 874 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 MFSD2AQ8NA29 543 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 ATP11CQ8NB49 1132 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 TMIEQ8NEW7 156 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 CFAP57Q96MR6 1250 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 RETREG1Q9H6L5 497 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 PREBQ9HCU5 417 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 ARHGAP20Q9P2F6 1191 aa13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 PPARGC1AQ9UBK2 798 aaKnown RBP13.39□□□□□ -0.27
ATPAF2-207ENST00000488753 ZZEF1O43149 2961 aa13.38□□□□□ -0.27
ATPAF2-207ENST00000488753 CHD6Q8TD26 2715 aa13.38□□□□□ -0.27
ATPAF2-207ENST00000488753 SRRM3A6NNA2 597 aaPredicted RBP13.38□□□□□ -0.27
ATPAF2-207ENST00000488753 GOLGA8SH3BPF8 625 aa13.38□□□□□ -0.27
ATPAF2-207ENST00000488753 TLR4O00206 839 aa13.38□□□□□ -0.27
ATPAF2-207ENST00000488753 RNGTTO60942 597 aaKnown RBP13.38□□□□□ -0.27
ATPAF2-207ENST00000488753 GFPT2O94808 682 aa13.38□□□□□ -0.27
ATPAF2-207ENST00000488753 MT-CO1P00395 513 aa13.38□□□□□ -0.27
ATPAF2-207ENST00000488753 PRNPP04156 253 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms