RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 ATP13A1Q9HD20 1204 aa16.39■□□□□ 0.21
ERGIC3-216ENST00000488384 OSGEPQ9NPF4 335 aa16.39■□□□□ 0.21
ERGIC3-216ENST00000488384 USP36Q9P275 1121 aaKnown RBP16.39■□□□□ 0.21
ERGIC3-216ENST00000488384 CYP8B1Q9UNU6 501 aa16.39■□□□□ 0.21
ERGIC3-216ENST00000488384 TARSL2A2RTX5 802 aaKnown RBP16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 EEF2KO00418 725 aaKnown RBP16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 FGF10O15520 208 aaPredicted RBP16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 RAMP2O60895 175 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 PROSCO94903 275 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 MT-CO1P00395 513 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 SRCP12931 536 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 NNMTP40261 264 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 RPS14P62263 151 aaKnown RBP16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 ARF5P84085 180 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 BYSLQ13895 437 aaKnown RBP16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 ELF2Q15723 593 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 DPYSL2Q16555 572 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 PPP6R3Q5H9R7 873 aaPredicted RBP16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 KCNT1Q5JUK3 1230 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 LINGO4Q6UY18 593 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 ABCA7Q8IZY2 2146 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 SH2D3CQ8N5H7 860 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 PTPRN2Q92932 1015 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 SPON2Q9BUD6 331 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 ACE2Q9BYF1 805 aaPredicted RBP16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 CATSPERBQ9H7T0 1116 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 NCDNQ9UBB6 729 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 GMEB2Q9UKD1 530 aa16.38■□□□□ 0.21
ERGIC3-216ENST00000488384 SOWAHDA6NJG2 315 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 K7ERQ8 282 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 CBX4O00257 560 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 MTA2O94776 668 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 EPN2O95208 641 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 LCA5LO95447 670 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 IGLV3-19P01714 112 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 GOT1P17174 413 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 ETFBP38117 255 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 TPMTP51580 245 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 DLG2Q15700 870 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 BOLA3Q53S33 107 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 ZNF776Q68DI1 518 aaPredicted RBP16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 RFX8Q6ZV50 586 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 Q6ZVU0 165 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 CCDC170Q8IYT3 715 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 SLC35G2Q8TBE7 412 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 TEKT4Q8WW24 435 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 RFFLQ8WZ73 363 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 LOXL4Q96JB6 756 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 MAGEH1Q9H213 219 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 ZWILCHQ9H900 591 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 ITM2CQ9NQX7 267 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 INTUQ9ULD6 942 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 SDK1Q7Z5N4 2213 aa16.37■□□□□ 0.21
ERGIC3-216ENST00000488384 TNRC6BQ9UPQ9 1833 aaKnown RBP16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 SMAD6O43541 496 aaKnown RBP16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 RHOBTB1O94844 696 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 CD160O95971 181 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 RETP07949 1114 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 RARAP10276 462 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 SERPINH1P50454 418 aaKnown RBP16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 CLCN6P51797 869 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 ZBTB16Q05516 673 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 DPYSQ14117 519 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 ELAVL3Q14576 367 aaKnown RBP16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 POLD3Q15054 466 aaPredicted RBP16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 IL31Q6EBC2 164 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 RETSATQ6NUM9 610 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 C22orf39Q6P5X5 142 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 RHOT2Q8IXI1 618 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 UMODL1-AS1Q8N2C9 162 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 STK40Q8N2I9 435 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 ATP11CQ8NB49 1132 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 SPC24Q8NBT2 197 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 HSPH1Q92598 858 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 HMCESQ96FZ2 354 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 HINFPQ9BQA5 517 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 CWC15Q9P013 229 aaKnown RBP16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 LCMT1Q9UIC8 334 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 ACTL7AQ9Y615 435 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 THADAQ6YHU6 1953 aa16.36■□□□□ 0.21
ERGIC3-216ENST00000488384 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 ACADMP11310 421 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 CD6P30203 668 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 MAN1A1P33908 653 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 PSMD8P48556 350 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 ZNF135P52742 658 aaPredicted RBP16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 TAS2R40P59535 323 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 TCEAL1Q15170 157 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 CST6Q15828 149 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 PARP15Q460N3 678 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 ACCSLQ4AC99 568 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 SLC36A4Q6YBV0 504 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 LPCAT2Q7L5N7 544 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 TMTC1Q8IUR5 882 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 TMEM139Q8IV31 216 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 MMAAQ8IVH4 418 aaKnown RBP16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 TMEFF1Q8IYR6 380 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 NPWQ8N729 165 aa16.35■□□□□ 0.21
ERGIC3-216ENST00000488384 RMDN1Q96DB5 314 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms