RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 GRM2Q14416 872 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 PRKD1Q15139 912 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-242ENST00000488013 OASLQ15646 514 aaKnown RBP11.29□□□□□ -0.6
HDLBP-242ENST00000488013 P3H1Q32P28 736 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 INO80DQ53TQ3 878 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-242ENST00000488013 RNF219Q5W0B1 726 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-242ENST00000488013 GRAMD4Q6IC98 578 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 ZC3H18Q86VM9 953 aaKnown RBP11.29□□□□□ -0.6
HDLBP-242ENST00000488013 RALGPS2Q86X27 583 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-242ENST00000488013 ARHGAP12Q8IWW6 846 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 ETFBKMTQ8IXQ9 262 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 SLC44A3Q8N4M1 653 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 UCMAQ8WVF2 138 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 HTR3CQ8WXA8 447 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 LRRC45Q96CN5 670 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 RTP4Q96DX8 246 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 HMCESQ96FZ2 354 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 CCDC114Q96M63 670 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 HERPUD2Q9BSE4 406 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 SPON2Q9BUD6 331 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 TMEM121BQ9BXQ6 578 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-242ENST00000488013 RAB17Q9H0T7 212 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 HPS4Q9NQG7 708 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 SLC2A4RGQ9NR83 387 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 RBM12Q9NTZ6 932 aaKnown RBP11.29□□□□□ -0.6
HDLBP-242ENST00000488013 DNAJC17Q9NVM6 304 aaKnown RBP11.29□□□□□ -0.6
HDLBP-242ENST00000488013 SAE1Q9UBE0 346 aaPredicted RBP11.29□□□□□ -0.6
HDLBP-242ENST00000488013 DNPEPQ9ULA0 475 aa11.29□□□□□ -0.6
HDLBP-242ENST00000488013 C5orf60A6NFR6 353 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 SGK1O00141 431 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 ARNTLO00327 626 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 PRAMEF11O60813 436 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 SRFP11831 508 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 ARSAP15289 507 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 POLR2EP19388 210 aaKnown RBP11.28□□□□□ -0.6
HDLBP-242ENST00000488013 GRIA2P42262 883 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 IRAK1P51617 712 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 SGSHP51688 502 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 IFI35P80217 286 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-242ENST00000488013 LMAN2Q12907 356 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 PPP1R7Q15435 360 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 PLEKHG6Q3KR16 790 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 MARC1Q5VT66 337 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 TRIM68Q6AZZ1 485 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 ITPRIPL1Q6GPH6 555 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 C8orf74Q6P047 294 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 KIAA0907Q7Z7F0 614 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-242ENST00000488013 CIR1Q86X95 450 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-242ENST00000488013 KLHL7Q8IXQ5 586 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 ALLCQ8N6M5 410 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 KDM1BQ8NB78 822 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 BBOF1Q8ND07 529 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 KCNV2Q8TDN2 545 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 ATG4AQ8WYN0 398 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 MAML1Q92585 1016 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 RUBCNQ92622 972 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 BHMTQ93088 406 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 MYEOVQ96EZ4 313 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 ASIC4Q96FT7 647 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 CELF6Q96J87 481 aaKnown RBP11.28□□□□□ -0.6
HDLBP-242ENST00000488013 PNKPQ96T60 521 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 KRT12Q99456 494 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 PLA2G2FQ9BZM2 168 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 DDX47Q9H0S4 455 aaKnown RBP11.28□□□□□ -0.6
HDLBP-242ENST00000488013 NOL6Q9H6R4 1146 aaKnown RBP11.28□□□□□ -0.6
HDLBP-242ENST00000488013 RRAGDQ9NQL2 400 aaPredicted RBP11.28□□□□□ -0.6
HDLBP-242ENST00000488013 ABCB8Q9NUT2 735 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 PLK2Q9NYY3 685 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 SMARCAL1Q9NZC9 954 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 PAK5Q9P286 719 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 SEPT3Q9UH03 358 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 GGA2Q9UJY4 613 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 R3HDM2Q9Y2K5 976 aaKnown RBP11.28□□□□□ -0.6
HDLBP-242ENST00000488013 UTP11Q9Y3A2 253 aaKnown RBP11.28□□□□□ -0.6
HDLBP-242ENST00000488013 OR51B4Q9Y5P0 310 aa11.28□□□□□ -0.6
HDLBP-242ENST00000488013 A0A0A0MRY4 1105 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 A0A0D9SEW6 157 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 GOLGA6CA6NDK9 693 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 GOLGA6BA6NDN3 693 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 SMAPO00193 183 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 CBX4O00257 560 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 MAN2B1O00754 1011 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 KCNN4O15554 427 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 MAFKO60675 156 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 TULP3O75386 442 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 GCATO75600 419 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 SRPRAP08240 638 aaKnown RBP11.27□□□□□ -0.61
HDLBP-242ENST00000488013 GOLGA6DP0CG33 693 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 CCNB1P14635 433 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 IL9P15248 144 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 SP100P23497 879 aaPredicted RBP11.27□□□□□ -0.61
HDLBP-242ENST00000488013 MCM3P25205 808 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 HLA-FP30511 346 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 GJA4P35212 333 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 CSKP41240 450 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 MAPK8P45983 427 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 ZP2Q05996 745 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 TNK2Q07912 1038 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 SNX1Q13596 522 aa11.27□□□□□ -0.61
HDLBP-242ENST00000488013 TEX44Q53QW1 395 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms