RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 FAM90A9PA6NNJ1 464 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 FAM90A5PA8MXJ8 464 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 MS4A18H0YCH9 400 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 FAM90A15PP0C7V4 464 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 FAM90A14PP0C7W9 464 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 FCGR1AP12314 374 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 PRPH2P23942 346 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 TDRD12Q587J7 1177 aaKnown RBP4.59□□□□□ -1.67
SMC4-219ENST00000487747 IGFN1Q86VF2 1251 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 CCAR1Q8IX12 1150 aaKnown RBP4.59□□□□□ -1.67
SMC4-219ENST00000487747 NRSN1Q8IZ57 195 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 TMED6Q8WW62 240 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 TMEM120AQ9BXJ8 343 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 TP63Q9H3D4 680 aaPredicted RBP4.59□□□□□ -1.67
SMC4-219ENST00000487747 ACTR5Q9H9F9 607 aaPredicted RBP4.59□□□□□ -1.67
SMC4-219ENST00000487747 SEPSECSQ9HD40 501 aaKnown RBP4.59□□□□□ -1.67
SMC4-219ENST00000487747 Q9N2J8 555 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 ZDHHC7Q9NXF8 308 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 SHROOM4Q9ULL8 1493 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 CNTN6Q9UQ52 1028 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 RAP2CQ9Y3L5 183 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 RAI2Q9Y5P3 530 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 SLC4A4Q9Y6R1 1079 aa4.59□□□□□ -1.67
SMC4-219ENST00000487747 WDR81Q562E7 1941 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 LDB3O75112 727 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 HEXIM1O94992 359 aaKnown RBP4.58□□□□□ -1.68
SMC4-219ENST00000487747 PARNO95453 639 aaKnown RBP4.58□□□□□ -1.68
SMC4-219ENST00000487747 UNGP13051 313 aaPredicted RBP4.58□□□□□ -1.68
SMC4-219ENST00000487747 ABCB4P21439 1286 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 GNLYP22749 145 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 KRTAP5-9P26371 169 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 AVPR1AP37288 418 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 DSC1Q08554 894 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 PLK5Q496M5 336 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 KRTAP5-4Q6L8H1 288 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 SPSB3Q6PJ21 355 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 CREB3L2Q70SY1 520 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 RNF144BQ7Z419 303 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 FAM185AQ8N0U4 392 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 DPP10Q8N608 796 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 STYXQ8WUJ0 223 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 MUL1Q969V5 352 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 CCDC138Q96M89 665 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 C1QTNF4Q9BXJ3 329 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 OCIAD1Q9NX40 245 aa4.58□□□□□ -1.68
SMC4-219ENST00000487747 VWA5AO00534 786 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 GYS1P13807 737 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 TYK2P29597 1187 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 CYP2J2P51589 502 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 RCAN1P53805 252 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 BNC1Q01954 994 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 PLCB4Q15147 1175 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 C8orf82Q6P1X6 216 aaPredicted RBP4.57□□□□□ -1.68
SMC4-219ENST00000487747 MTFR2Q6P444 385 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 GSG1LQ6UXU4 331 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 FJX1Q86VR8 437 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 CEP76Q8TAP6 659 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 HMGB4Q8WW32 186 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 IL25Q9H293 177 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 TMEM248Q9NWD8 314 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 KCNG2Q9UJ96 466 aa4.57□□□□□ -1.68
SMC4-219ENST00000487747 A0A0A0MQY5 61 aa4.56□□□□□ -1.68
SMC4-219ENST00000487747 MBD3L5A6NJ08 208 aaPredicted RBP4.56□□□□□ -1.68
SMC4-219ENST00000487747 TNFRSF6BO95407 300 aa4.56□□□□□ -1.68
SMC4-219ENST00000487747 HOXB9P17482 250 aaPredicted RBP4.56□□□□□ -1.68
SMC4-219ENST00000487747 SEC61A1P61619 476 aaKnown RBP4.56□□□□□ -1.68
SMC4-219ENST00000487747 ZNF718Q3SXZ3 478 aa4.56□□□□□ -1.68
SMC4-219ENST00000487747 TRIM60Q495X7 471 aa4.56□□□□□ -1.68
SMC4-219ENST00000487747 VWA5B1Q5TIE3 1220 aa4.56□□□□□ -1.68
SMC4-219ENST00000487747 FAM171A1Q5VUB5 890 aa4.56□□□□□ -1.68
SMC4-219ENST00000487747 H1FNTQ75WM6 255 aaPredicted RBP4.56□□□□□ -1.68
SMC4-219ENST00000487747 VPS52Q8N1B4 723 aa4.56□□□□□ -1.68
SMC4-219ENST00000487747 BICD2Q8TD16 824 aa4.56□□□□□ -1.68
SMC4-219ENST00000487747 KRTAP4-4Q9BYR3 166 aa4.56□□□□□ -1.68
SMC4-219ENST00000487747 NFU1Q9UMS0 254 aa4.56□□□□□ -1.68
SMC4-219ENST00000487747 PHTF1Q9UMS5 762 aa4.56□□□□□ -1.68
SMC4-219ENST00000487747 RCE1Q9Y256 329 aa4.56□□□□□ -1.68
SMC4-219ENST00000487747 KIF26BQ2KJY2 2108 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 SAC3D1A6NKF1 404 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 LINC01565O15544 149 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 SOX30O94993 753 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 CYP21A2P08686 494 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 LYL1P12980 280 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 SYTL3Q4VX76 610 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 HEPHL1Q6MZM0 1159 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 KSR2Q6VAB6 950 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 TRIM74Q86UV6 250 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 TRIM73Q86UV7 250 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 ENDOVQ8N8Q3 282 aaKnown RBP4.55□□□□□ -1.68
SMC4-219ENST00000487747 OR14A16Q8NHC5 309 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 C2CD4CQ8TF44 421 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 RTP4Q96DX8 246 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 FIZ1Q96SL8 496 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 NPAS1Q99742 590 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 RETREG1Q9H6L5 497 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 DDX31Q9H8H2 851 aaKnown RBP4.55□□□□□ -1.68
SMC4-219ENST00000487747 CDH22Q9UJ99 828 aa4.55□□□□□ -1.68
SMC4-219ENST00000487747 ERRFI1Q9UJM3 462 aaPredicted RBP4.55□□□□□ -1.68
SMC4-219ENST00000487747 PLSCR5A0PG75 271 aa4.54□□□□□ -1.68
SMC4-219ENST00000487747 ANO9A1A5B4 782 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms