RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 CLSTN2Q9H4D0 955 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 GDF3Q9NR23 364 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 TMPRSS4Q9NRS4 437 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.53□□□□□ -0.4
VPS16-208ENST00000487461 FTSJ1Q9UET6 329 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 VPS28Q9UK41 221 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 TPX2Q9ULW0 747 aaKnown RBP12.53□□□□□ -0.4
VPS16-208ENST00000487461 PLXNA2O75051 1894 aa12.53□□□□□ -0.4
VPS16-208ENST00000487461 ATRXP46100 2492 aa12.52□□□□□ -0.4
VPS16-208ENST00000487461 TRABD2BA6NFA1 517 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 DRGXA6NNA5 263 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 K7ERQ8 282 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 SLC7A4O43246 635 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 PLRG1O43660 514 aaKnown RBP12.52□□□□□ -0.41
VPS16-208ENST00000487461 BNIP3LO60238 219 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 SNAP91O60641 907 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 ITGAVP06756 1048 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 PRKCSHP14314 528 aaPredicted RBP12.52□□□□□ -0.41
VPS16-208ENST00000487461 CYP11B1P15538 503 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 ZNF18P17022 549 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 MAT2AP31153 395 aaKnown RBP12.52□□□□□ -0.41
VPS16-208ENST00000487461 SULT1E1P49888 294 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 NXPH1P58417 271 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 BNIP3Q12983 259 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 CAMK2BQ13554 666 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 SMAD1Q15797 465 aaKnown RBP12.52□□□□□ -0.41
VPS16-208ENST00000487461 DPCR1Q3MIW9 517 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 BRMS1LQ5PSV4 323 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 ARTNQ5T4W7 220 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 KLHDC7AQ5VTJ3 777 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 AGBL4Q5VU57 503 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 FAM46CQ5VWP2 391 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 NAPEPLDQ6IQ20 393 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 C19orf48Q6RUI8 117 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 DHRS13Q6UX07 377 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 SPATS2Q86XZ4 545 aaKnown RBP12.52□□□□□ -0.41
VPS16-208ENST00000487461 FAM114A1Q8IWE2 563 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 GALNT15Q8N3T1 639 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 MFSD2AQ8NA29 543 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 TMEM35BQ8NCS4 154 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 C18orf8Q96DM3 657 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 PGAP3Q96FM1 320 aaPredicted RBP12.52□□□□□ -0.41
VPS16-208ENST00000487461 TBCBQ99426 244 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 NAA15Q9BXJ9 866 aaKnown RBP12.52□□□□□ -0.41
VPS16-208ENST00000487461 MUC3BQ9H195 1237 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 PDCL3Q9H2J4 239 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 RRN3Q9NYV6 651 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 GPSM3Q9Y4H4 160 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 FHOD1Q9Y613 1164 aa12.52□□□□□ -0.41
VPS16-208ENST00000487461 ANKRD11Q6UB99 2663 aaPredicted RBP12.52□□□□□ -0.41
VPS16-208ENST00000487461 APC2O95996 2303 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 A0A0D9SEW6 157 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 RNF103O00237 685 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 ENC1O14682 589 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 ALOX15BO15296 676 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 SMAD6O43541 496 aaKnown RBP12.51□□□□□ -0.41
VPS16-208ENST00000487461 LDOC1O95751 146 aaPredicted RBP12.51□□□□□ -0.41
VPS16-208ENST00000487461 F9P00740 461 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 CTSLP07711 333 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 RHOCP08134 193 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 SRCP12931 536 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 ERCC5P28715 1186 aaPredicted RBP12.51□□□□□ -0.41
VPS16-208ENST00000487461 RXRGP48443 463 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 TAS2R38P59533 333 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 DEUP1Q05D60 604 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 CYP4F3Q08477 520 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 RAPGEF1Q13905 1077 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 INAVAQ3KP66 663 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 SLC25A52Q3SY17 297 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 C2CD6Q53TS8 623 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 SLC45A4Q5BKX6 768 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 TAF3Q5VWG9 929 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 TRNP1Q6NT89 227 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 TRIM69Q86WT6 500 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 ERICH1Q86X53 443 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 XYLT1Q86Y38 959 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 EID2Q8N6I1 236 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 ATP11CQ8NB49 1132 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 OR2A12Q8NGT7 310 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 CNDP2Q96KP4 475 aaKnown RBP12.51□□□□□ -0.41
VPS16-208ENST00000487461 C1orf74Q96LT6 269 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 ERVMER34-1Q9H9K5 563 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 SAMSN1Q9NSI8 373 aaKnown RBP12.51□□□□□ -0.41
VPS16-208ENST00000487461 MPP6Q9NZW5 540 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 VPS51Q9UID3 782 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 STAP1Q9ULZ2 295 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 HS3ST2Q9Y278 367 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 CA5BQ9Y2D0 317 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 RAXQ9Y2V3 346 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 ACACAQ13085 2346 aa12.51□□□□□ -0.41
VPS16-208ENST00000487461 URB1O60287 2271 aaKnown RBP12.5□□□□□ -0.41
VPS16-208ENST00000487461 DSPP15924 2871 aaKnown RBP12.5□□□□□ -0.41
VPS16-208ENST00000487461 FREM2Q5SZK8 3169 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 C1QTNF3-AMACRE9PGA6 284 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 YKT6O15498 198 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 GLDCP23378 1020 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 RRM1P23921 792 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 EPHA8P29322 1005 aaPredicted RBP12.5□□□□□ -0.41
VPS16-208ENST00000487461 CHRNA3P32297 505 aa12.5□□□□□ -0.41
VPS16-208ENST00000487461 FLT3P36888 993 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 156 ms