RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 OR4C6Q8NH72 309 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 SMARCE1Q969G3 411 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 MED15Q96RN5 788 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 MYOCQ99972 504 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 THAP9Q9H5L6 903 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 FAM204AQ9H8W3 233 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 UCKL1Q9NWZ5 548 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 ARID1BQ8NFD5 2236 aaPredicted RBP19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 PSMA7O14818 248 aa19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 RNGTTO60942 597 aaKnown RBP19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 THEGLP0DJG4 465 aa19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 PRLRP16471 622 aa19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 ZNF18P17022 549 aa19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 PIP5KL1Q5T9C9 394 aa19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 ZNF605Q86T29 641 aa19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 PIAS4Q8N2W9 510 aaPredicted RBP19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 RPRD1AQ96P16 312 aaPredicted RBP19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 LGMNQ99538 433 aa19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 FEM1AQ9BSK4 669 aa19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 CAAP1Q9H8G2 361 aa19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 KLHL11Q9NVR0 708 aa19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 DDIT4Q9NX09 232 aa19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 OR51B4Q9Y5P0 310 aa19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 ASH1LQ9NR48 2969 aaKnown RBP19.98■□□□□ 0.79
SMPDL3A-202ENST00000487215 SYNJ2BP-COX16A0A087WUM0 186 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 A0A1W2PQU0 124 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 SLC31A1O15431 190 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 FFAR2O15552 330 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 MED7O43513 233 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 BNIP3LO60238 219 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 LETM1O95202 739 aaPredicted RBP19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 GIMD1P0DJR0 217 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 SLC2A3P11169 496 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 CD44P16070 742 aaKnown RBP19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 CCR1P32246 355 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 KCNMA1Q12791 1236 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 PDCLQ13371 301 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 HS1BP3Q53T59 392 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 CDCP2Q5VXM1 449 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 SH2D3CQ8N5H7 860 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 ZNF248Q8NDW4 579 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 ZNF606Q8WXB4 792 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 KLK6Q92876 244 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 DHTKD1Q96HY7 919 aaPredicted RBP19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 PPP1R9BQ96SB3 815 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 GTPBP4Q9BZE4 634 aaKnown RBP19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 COX16Q9P0S2 106 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 VPS28Q9UK41 221 aa19.97■□□□□ 0.79
SMPDL3A-202ENST00000487215 CTSLP07711 333 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 CKMT1AP12532 417 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 GGCXP38435 758 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 CDK17Q00537 523 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 CFHR1Q03591 330 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 KCNH2Q12809 1159 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 STIM1Q13586 685 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 AUHQ13825 339 aaKnown RBP19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 ISM2Q6H9L7 571 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 TTI2Q6NXR4 508 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 TMC6Q7Z403 805 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 DEFB106AQ8N104 65 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 RNF34Q969K3 372 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 COL26A1Q96A83 441 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 NAF1Q96HR8 494 aaKnown RBP19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 HIC2Q96JB3 615 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 ZNF578Q96N58 590 aaPredicted RBP19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 SLC2A13Q96QE2 648 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 INTS2Q9H0H0 1204 aaKnown RBP19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 FZD3Q9NPG1 666 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 ACP6Q9NPH0 428 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 VANGL2Q9ULK5 521 aa19.96■□□□□ 0.79
SMPDL3A-202ENST00000487215 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 THAP12O43422 761 aa19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 OPA1O60313 960 aa19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 PIAS2O75928 621 aa19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 MPOP05164 745 aa19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 SRCP12931 536 aa19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 PCBP4P57723 403 aaKnown RBP19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 ZNF177Q13360 481 aaPredicted RBP19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 ZNF284Q2VY69 593 aa19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 NEK5Q6P3R8 708 aa19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 OR13H1Q8NG92 308 aa19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 ARRDC3Q96B67 414 aa19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 CALN1Q9BXU9 219 aa19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 HS3ST2Q9Y278 367 aa19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 HS3ST4Q9Y661 456 aa19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 CFAP46Q8IYW2 2715 aa19.95■□□□□ 0.78
SMPDL3A-202ENST00000487215 FLNBO75369 2602 aaKnown RBP19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 ERVH48-1M5A8F1 160 aa19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 MT-CO1P00395 513 aa19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 MYF5P13349 255 aa19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 GNA15P30679 374 aa19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 AKT2P31751 481 aa19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 GABREP78334 506 aa19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 KLHL10Q6JEL2 608 aa19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 C14orf80Q86SX3 495 aa19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 HORMAD1Q86X24 394 aa19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 TRIM59Q8IWR1 403 aa19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 APOLD1Q96LR9 279 aa19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 NOX5Q96PH1 765 aa19.94■□□□□ 0.78
SMPDL3A-202ENST00000487215 DEPDC7Q96QD5 511 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms