RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 RASA4O43374 803 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 BNIP3LO60238 219 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 KRT1P04264 644 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 PTMAP06454 111 aaKnown RBP12.12□□□□□ -0.47
HPS4-214ENST00000485842 CD48P09326 243 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 NDUFV2P19404 249 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 AMPD1P23109 780 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 HOXA6P31267 233 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 SLC1A1P43005 524 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 KIF5AQ12840 1032 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 MMRN1Q13201 1228 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 SRSF5Q13243 272 aaKnown RBP12.12□□□□□ -0.47
HPS4-214ENST00000485842 DPYSQ14117 519 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 GSE1Q14687 1217 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 HNRNPA1L2Q32P51 320 aaKnown RBP12.12□□□□□ -0.47
HPS4-214ENST00000485842 ACCSLQ4AC99 568 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 C11orf63Q6NUN7 778 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 ZC3H14Q6PJT7 736 aaKnown RBP12.12□□□□□ -0.47
HPS4-214ENST00000485842 LEKR1Q6ZMV7 388 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 DAAM2Q86T65 1068 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 WDR5BQ86VZ2 330 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 RASSF3Q86WH2 238 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 ATP11CQ8NB49 1132 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 NETO2Q8NC67 525 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 TPCN2Q8NHX9 752 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 HMCESQ96FZ2 354 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 CSPG4P5Q96PW8 444 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 NOL6Q9H6R4 1146 aaKnown RBP12.12□□□□□ -0.47
HPS4-214ENST00000485842 CD248Q9HCU0 757 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 PRSS16Q9NQE7 514 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 SUN2Q9UH99 717 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 INVSQ9Y283 1065 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 MFHAS1Q9Y4C4 1052 aa12.12□□□□□ -0.47
HPS4-214ENST00000485842 EDDM13A0A1B0GTR0 161 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 DFFAO00273 331 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 SIN3BO75182 1162 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 MT-CO1P00395 513 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 SRCP12931 536 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 VAV1P15498 845 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 HCAR3P49019 387 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 YBEYP58557 167 aaPredicted RBP12.11□□□□□ -0.47
HPS4-214ENST00000485842 CCZ1BP86790 482 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 CCZ1P86791 482 aaPredicted RBP12.11□□□□□ -0.47
HPS4-214ENST00000485842 NHLH1Q02575 133 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 CAMK2GQ13555 558 aaPredicted RBP12.11□□□□□ -0.47
HPS4-214ENST00000485842 DPYSL3Q14195 570 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 DLG2Q15700 870 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 ODF2Q5BJF6 829 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 RETSATQ6NUM9 610 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 TMCO3Q6UWJ1 677 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 Q6ZVU0 165 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 RHOT1Q8IXI2 618 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 UMODL1-AS1Q8N2C9 162 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 SH2D3CQ8N5H7 860 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 NPWQ8N729 165 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 KDM1BQ8NB78 822 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 ZBTB44Q8NCP5 570 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 OR2T3Q8NH03 318 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 NELL1Q92832 810 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 MRGPRX1Q96LB2 322 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 MKRN2Q9H000 416 aaKnown RBP12.11□□□□□ -0.47
HPS4-214ENST00000485842 KLC2Q9H0B6 622 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 PRDM16Q9HAZ2 1276 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 ETNK2Q9NVF9 386 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 DONSONQ9NYP3 566 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 TRIM10Q9UDY6 481 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 EBF1Q9UH73 591 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 HPCAL4Q9UM19 191 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 ACTL7AQ9Y615 435 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 ADGRG1Q9Y653 693 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 ALG6Q9Y672 507 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 NUP205Q92621 2012 aa12.11□□□□□ -0.47
HPS4-214ENST00000485842 CCDC163A0A0D9SF12 145 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 ARHGAP42A6NI28 874 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 BTNL10A8MVZ5 291 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 K7ERQ8 282 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 DCLK1O15075 740 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 SMAD6O43541 496 aaKnown RBP12.1□□□□□ -0.47
HPS4-214ENST00000485842 ATP9BO43861 1147 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 RPP40O75818 363 aaKnown RBP12.1□□□□□ -0.47
HPS4-214ENST00000485842 ZMPSTE24O75844 475 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 SERPINH1P50454 418 aaKnown RBP12.1□□□□□ -0.47
HPS4-214ENST00000485842 ARSEP51690 589 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 NDST2P52849 883 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 COPAP53621 1224 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 ARF5P84085 180 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 PDK2Q15119 407 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 PARP15Q460N3 678 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 C22orf39Q6P5X5 142 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 PRR23BQ6ZRT6 265 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 CEP68Q76N32 757 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 TMPRSS6Q8IU80 811 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 MAP7D3Q8IWC1 876 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 RLN3Q8WXF3 142 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 RAPGEF5Q92565 580 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 TSC1Q92574 1164 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 SIPA1Q96FS4 1042 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 ZNF670Q9BS34 389 aa12.1□□□□□ -0.47
HPS4-214ENST00000485842 ACE2Q9BYF1 805 aaPredicted RBP12.1□□□□□ -0.47
HPS4-214ENST00000485842 SLC39A8Q9C0K1 460 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms