RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 SPATA6Q9NWH7 488 aaPredicted RBP15.85■□□□□ 0.13
RPUSD3-217ENST00000485705 SLCO3A1Q9UIG8 710 aa15.85■□□□□ 0.13
RPUSD3-217ENST00000485705 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.85■□□□□ 0.13
RPUSD3-217ENST00000485705 STON1Q9Y6Q2 735 aa15.85■□□□□ 0.13
RPUSD3-217ENST00000485705 CACNA1HO95180 2353 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 CCDC66A2RUB6 948 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 CBX4O00257 560 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 MFSD11O43934 449 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 ZRANB2O95218 330 aaKnown RBP eCLIP15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 MAP3K6O95382 1288 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 ASLP04424 464 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 KRT10P13645 584 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 COL9A1P20849 921 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 NTSR1P30989 418 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 MAGEA9P43362 315 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 NDST2P52849 883 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 YBEYP58557 167 aaPredicted RBP15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 FNDC3BQ53EP0 1204 aaKnown RBP15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 ODF2Q5BJF6 829 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 TMEM92Q6UXU6 159 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 LEKR1Q6ZMV7 388 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 ARHGAP36Q6ZRI8 547 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 ZNF354CQ86Y25 554 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 RCOR2Q8IZ40 523 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 SPEM1Q8N4L4 309 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 EXD1Q8NHP7 514 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 CCDC26Q8TAB7 109 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 HES6Q96HZ4 224 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 MTG2Q9H4K7 406 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 MMP17Q9ULZ9 603 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 PLA2G4CQ9UP65 541 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 RAD54BQ9Y620 910 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 WDFY4Q6ZS81 3184 aa15.84■□□□□ 0.13
RPUSD3-217ENST00000485705 TTC34A8MYJ7 566 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 ZNF487B1APH4 448 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 K7ERQ8 282 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 DFFAO00273 331 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 CD160O95971 181 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 SRPRAP08240 638 aaKnown RBP15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 PYGMP11217 842 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 ETFBP38117 255 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 PAPOLAP51003 745 aaKnown RBP15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 RWDD2BP57060 319 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 GBE1Q04446 702 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 SULT2A1Q06520 285 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 ADCY2Q08462 1091 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 SLC10A2Q12908 348 aaPredicted RBP15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 ZNF211Q13398 564 aaPredicted RBP15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 SERINC3Q13530 473 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 ENPP2Q13822 863 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 PAFAH1B3Q15102 231 aaKnown RBP15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 PARP15Q460N3 678 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 EOGTQ5NDL2 527 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 MEI1Q5TIA1 1274 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 DCAF12L1Q5VU92 463 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 KAZNQ674X7 775 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 KIAA1211LQ6NV74 962 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 SERPINA13PQ6UXR4 307 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 SYT13Q7L8C5 426 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 VSIG1Q86XK7 387 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 RFX6Q8HWS3 928 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 CCDC50Q8IVM0 306 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 C17orf53Q8N3J3 647 aaPredicted RBP15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 ACDQ96AP0 544 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 ALS2CR12Q96Q35 445 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 GABRG3Q99928 467 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 HERPUD2Q9BSE4 406 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 C2orf49Q9BVC5 232 aaPredicted RBP15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 TMEM245Q9H330 911 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 DONSONQ9NYP3 566 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 SLC25A13Q9UJS0 675 aa15.83■□□□□ 0.12
RPUSD3-217ENST00000485705 hCG_1818297A0A087WSY0 165 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 ARHGAP42A6NI28 874 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 MIF4GDA9UHW6 222 aaKnown RBP15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 J3KR12 359 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 SMAD6O43541 496 aaKnown RBP15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 KDELR3O43731 214 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 ATG13O75143 517 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 SRCP12931 536 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 HOXB2P14652 356 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 VAV1P15498 845 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 CXCL12P48061 93 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 DYNLT1P63172 113 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 CRY1Q16526 586 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 HSF5Q4G112 596 aaPredicted RBP15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 SLC9A4Q6AI14 798 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 TSSK4Q6SA08 328 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 NPNTQ6UXI9 565 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 TRMT11Q7Z4G4 463 aaKnown RBP15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 C1orf210Q8IVY1 113 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 MAML2Q8IZL2 1156 aaPredicted RBP15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 LZTR1Q8N653 840 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 UBL4BQ8N7F7 174 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 PLD5Q8N7P1 536 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 TRIM58Q8NG06 486 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 LRRN4Q8WUT4 740 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 RBM41Q96IZ5 413 aaKnown RBP15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 HHIPQ96QV1 700 aa15.82■□□□□ 0.12
RPUSD3-217ENST00000485705 IER2Q9BTL4 223 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms