RNA–Protein interactions for RNA: ENST00000485680.1

SPTA1-207, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 3

Gene SPTA1, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-207ENST00000485680 CNTN6Q9UQ52 1028 aa5.18□□□□□ -1.58
SPTA1-207ENST00000485680 PCDHB2Q9Y5E7 798 aa5.18□□□□□ -1.58
SPTA1-207ENST00000485680 COL22A1Q8NFW1 1626 aaPredicted RBP5.18□□□□□ -1.58
SPTA1-207ENST00000485680 ELP1O95163 1332 aa5.18□□□□□ -1.58
SPTA1-207ENST00000485680 WDR19Q8NEZ3 1342 aa5.18□□□□□ -1.58
SPTA1-207ENST00000485680 VPS37CA5D8V6 355 aaPredicted RBP5.17□□□□□ -1.58
SPTA1-207ENST00000485680 H0Y3Z8 333 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 EIF3FO00303 357 aaPredicted RBP5.17□□□□□ -1.58
SPTA1-207ENST00000485680 PFKFB2O60825 505 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 FAM155BO75949 473 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 CYP21A2P08686 494 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 HSPD1P10809 573 aaKnown RBP5.17□□□□□ -1.58
SPTA1-207ENST00000485680 HSD3B1P14060 373 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 NDUFB7P17568 137 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 ADD2P35612 726 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 MAPK9P45984 424 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 DIO1P49895 249 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 EIF5P55010 431 aaKnown RBP5.17□□□□□ -1.58
SPTA1-207ENST00000485680 SEMA3BQ13214 749 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 KCNJ12Q14500 433 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 ZNF169Q14929 603 aaPredicted RBP5.17□□□□□ -1.58
SPTA1-207ENST00000485680 TRIM60Q495X7 471 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 NAA16Q6N069 864 aaPredicted RBP5.17□□□□□ -1.58
SPTA1-207ENST00000485680 TMED8Q6PL24 325 aaPredicted RBP5.17□□□□□ -1.58
SPTA1-207ENST00000485680 CPLX2Q6PUV4 134 aaKnown RBP5.17□□□□□ -1.58
SPTA1-207ENST00000485680 RFX8Q6ZV50 586 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 TRABD2AQ86V40 505 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 ANKRD18AQ8IVF6 992 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.17□□□□□ -1.58
SPTA1-207ENST00000485680 NCOA7Q8NI08 942 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 GPT2Q8TD30 523 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 RSC1A1Q92681 617 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 GTF3C6Q969F1 213 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 C3orf49Q96BT1 292 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 VPS50Q96JG6 964 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 PDLIM2Q96JY6 352 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 ZNF396Q96N95 335 aaPredicted RBP5.17□□□□□ -1.58
SPTA1-207ENST00000485680 EIF3CQ99613 913 aaKnown RBP5.17□□□□□ -1.58
SPTA1-207ENST00000485680 MACROD1Q9BQ69 325 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 FSD1LQ9BXM9 530 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 SEPSECSQ9HD40 501 aaKnown RBP5.17□□□□□ -1.58
SPTA1-207ENST00000485680 SAYSD1Q9NPB0 183 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 KIF17Q9P2E2 1029 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 MGAT4CQ9UBM8 478 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 FEM1BQ9UK73 627 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 MTMR6Q9Y217 621 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 ZBTB1Q9Y2K1 713 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 SPATA31A5Q5VU36 1347 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 SPATA31A7Q8IWB4 1347 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 NUP188Q5SRE5 1749 aa5.17□□□□□ -1.58
SPTA1-207ENST00000485680 RTL9Q8NET4 1388 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 PLCH1Q4KWH8 1693 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 GXYLT2A0PJZ3 443 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 SYCE3A1L190 88 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 QSOX1O00391 747 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 ZNF213O14771 459 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 PRAMEF2O60811 474 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 TJP3O95049 919 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 CAVIN2O95810 425 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 DLDP09622 509 aaKnown RBP5.16□□□□□ -1.58
SPTA1-207ENST00000485680 CPA1P15085 419 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 GPTP24298 496 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 ADRA1DP25100 572 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 THBS4P35443 961 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 CRKLP46109 303 aaKnown RBP5.16□□□□□ -1.58
SPTA1-207ENST00000485680 CCT8P50990 548 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 EEFSECP57772 596 aaKnown RBP5.16□□□□□ -1.58
SPTA1-207ENST00000485680 FAM3BP58499 235 aaPredicted RBP5.16□□□□□ -1.58
SPTA1-207ENST00000485680 SIM1P81133 766 aaPredicted RBP5.16□□□□□ -1.58
SPTA1-207ENST00000485680 TAP1Q03518 808 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 SF3A3Q12874 501 aaKnown RBP eCLIP5.16□□□□□ -1.58
SPTA1-207ENST00000485680 LMAN2Q12907 356 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 HLFQ16534 295 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 GALNTL6Q49A17 601 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 RNASE12Q5GAN4 147 aaKnown RBP5.16□□□□□ -1.58
SPTA1-207ENST00000485680 NFRKBQ6P4R8 1299 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 C16orf89Q6UX73 402 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 CYP26C1Q6V0L0 522 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 RAB11FIP2Q7L804 512 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 KRT27Q7Z3Y8 459 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 WDR53Q7Z5U6 358 aaPredicted RBP5.16□□□□□ -1.58
SPTA1-207ENST00000485680 GLCCI1Q86VQ1 547 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 RASAL3Q86YV0 1011 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 NECAB1Q8N987 351 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 ABHD11Q8NFV4 315 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 HMGB4Q8WW32 186 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 EDC3Q96F86 508 aaKnown RBP5.16□□□□□ -1.58
SPTA1-207ENST00000485680 UBXN10Q96LJ8 280 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 THAP7Q9BT49 309 aaPredicted RBP5.16□□□□□ -1.58
SPTA1-207ENST00000485680 AGXT2Q9BYV1 514 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 PUS3Q9BZE2 481 aaKnown RBP5.16□□□□□ -1.58
SPTA1-207ENST00000485680 NACAP1Q9BZK3 213 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 IL17RBQ9NRM6 502 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 VPS45Q9NRW7 570 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 DDX19AQ9NUU7 478 aaKnown RBP5.16□□□□□ -1.58
SPTA1-207ENST00000485680 KCND3Q9UK17 655 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 C19orf53Q9UNZ5 99 aaPredicted RBP5.16□□□□□ -1.58
SPTA1-207ENST00000485680 CNPY2Q9Y2B0 182 aa5.16□□□□□ -1.58
SPTA1-207ENST00000485680 ROBO1Q9Y6N7 1651 aa5.15□□□□□ -1.58
SPTA1-207ENST00000485680 SHANK3Q9BYB0 1731 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms