RNA–Protein interactions for RNA: ENST00000485645.5

SMC4-216, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-216ENST00000485645 SH2D3CQ8N5H7 860 aa17.61■□□□□ 0.41
SMC4-216ENST00000485645 FAM131CQ96AQ9 280 aa17.61■□□□□ 0.41
SMC4-216ENST00000485645 C18orf8Q96DM3 657 aa17.61■□□□□ 0.41
SMC4-216ENST00000485645 PGAP3Q96FM1 320 aaPredicted RBP17.61■□□□□ 0.41
SMC4-216ENST00000485645 CCDC86Q9H6F5 360 aaKnown RBP17.61■□□□□ 0.41
SMC4-216ENST00000485645 TMEM51Q9NW97 253 aa17.61■□□□□ 0.41
SMC4-216ENST00000485645 FTSJ1Q9UET6 329 aa17.61■□□□□ 0.41
SMC4-216ENST00000485645 SARDHQ9UL12 918 aa17.61■□□□□ 0.41
SMC4-216ENST00000485645 PPM1HQ9ULR3 514 aa17.61■□□□□ 0.41
SMC4-216ENST00000485645 GOLGA4Q13439 2230 aaKnown RBP17.61■□□□□ 0.41
SMC4-216ENST00000485645 PLK4O00444 970 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 ALOX15BO15296 676 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 LATO43561 262 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 PLRG1O43660 514 aaKnown RBP17.6■□□□□ 0.41
SMC4-216ENST00000485645 BNIP3LO60238 219 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 RTN2O75298 545 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 CNTN5O94779 1100 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 ITGAVP06756 1048 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 RHOCP08134 193 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 TFE3P19532 575 aaPredicted RBP17.6■□□□□ 0.41
SMC4-216ENST00000485645 SCNN1AP37088 669 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 CCDC157Q569K6 752 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 FAM102AQ5T9C2 384 aaPredicted RBP17.6■□□□□ 0.41
SMC4-216ENST00000485645 NAPEPLDQ6IQ20 393 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 LRRC31Q6UY01 552 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 Q6ZVU0 165 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 ERICH1Q86X53 443 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 GATAD2AQ86YP4 633 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 PIP4K2CQ8TBX8 421 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 NT5C3BQ969T7 300 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 FARP1Q9Y4F1 1045 aaPredicted RBP17.6■□□□□ 0.41
SMC4-216ENST00000485645 FHOD1Q9Y613 1164 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 FREM2Q5SZK8 3169 aa17.6■□□□□ 0.41
SMC4-216ENST00000485645 TLR4O00206 839 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 YKT6O15498 198 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 SRCP12931 536 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 NUDT1P36639 197 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 ARRB1P49407 418 aaPredicted RBP17.59■□□□□ 0.41
SMC4-216ENST00000485645 CNTN1Q12860 1018 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 SLC25A52Q3SY17 297 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 POM121L1PQ3SYA9 428 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 ALFQ53S48 1182 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 ACBD5Q5T8D3 534 aaPredicted RBP17.59■□□□□ 0.41
SMC4-216ENST00000485645 TAF3Q5VWG9 929 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 XYLT1Q86Y38 959 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 TBCBQ99426 244 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 C2orf49Q9BVC5 232 aaPredicted RBP17.59■□□□□ 0.41
SMC4-216ENST00000485645 NUP62CLQ9H1M0 184 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 ANLNQ9NQW6 1124 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 SAMSN1Q9NSI8 373 aaKnown RBP17.59■□□□□ 0.41
SMC4-216ENST00000485645 ARHGAP20Q9P2F6 1191 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 DMTF1Q9Y222 760 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 HS3ST2Q9Y278 367 aa17.59■□□□□ 0.41
SMC4-216ENST00000485645 ANKRD11Q6UB99 2663 aaPredicted RBP17.59■□□□□ 0.41
SMC4-216ENST00000485645 DRGXA6NNA5 263 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 I6L893 689 aaPredicted RBP17.58■□□□□ 0.4
SMC4-216ENST00000485645 MT-CO1P00395 513 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 UCHL3P15374 230 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 MAT2AP31153 395 aaKnown RBP17.58■□□□□ 0.4
SMC4-216ENST00000485645 NXPH1P58417 271 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 SHBQ15464 509 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 AGBL4Q5VU57 503 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 SETD3Q86TU7 594 aaPredicted RBP17.58■□□□□ 0.4
SMC4-216ENST00000485645 TRIM69Q86WT6 500 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 ZNF683Q8IZ20 524 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 OXR1Q8N573 874 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 MFSD2AQ8NA29 543 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 ATP11CQ8NB49 1132 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 MSANTD4Q8NCY6 345 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 SAP25Q8TEE9 199 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 C1orf74Q96LT6 269 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 CCDC114Q96M63 670 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 PSMB7Q99436 277 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 NAA15Q9BXJ9 866 aaKnown RBP17.58■□□□□ 0.4
SMC4-216ENST00000485645 SNX10Q9Y5X0 201 aa17.58■□□□□ 0.4
SMC4-216ENST00000485645 FAM170AA1A519 330 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 ENC1O14682 589 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 SNAP91O60641 907 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 MAGEC1O60732 1142 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 LDOC1O95751 146 aaPredicted RBP17.57■□□□□ 0.4
SMC4-216ENST00000485645 LSM8O95777 96 aaKnown RBP17.57■□□□□ 0.4
SMC4-216ENST00000485645 EPHA8P29322 1005 aaPredicted RBP17.57■□□□□ 0.4
SMC4-216ENST00000485645 STAT4Q14765 748 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 SMAD1Q15797 465 aaKnown RBP17.57■□□□□ 0.4
SMC4-216ENST00000485645 TCP11X2Q5H9J9 407 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 CT47A1Q5JQC4 288 aaPredicted RBP17.57■□□□□ 0.4
SMC4-216ENST00000485645 C6orf118Q5T5N4 469 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 NOP9Q86U38 636 aaKnown RBP17.57■□□□□ 0.4
SMC4-216ENST00000485645 IQCHQ86VS3 1027 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 MDM1Q8TC05 714 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 STK33Q9BYT3 514 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 ERVMER34-1Q9H9K5 563 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 MPP6Q9NZW5 540 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 VPS51Q9UID3 782 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 LHX6Q9UPM6 363 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 ZFYVE26Q68DK2 2539 aa17.57■□□□□ 0.4
SMC4-216ENST00000485645 DSPP15924 2871 aaKnown RBP17.57■□□□□ 0.4
SMC4-216ENST00000485645 ACACAQ13085 2346 aa17.56■□□□□ 0.4
SMC4-216ENST00000485645 KNTC1P50748 2209 aa17.56■□□□□ 0.4
SMC4-216ENST00000485645 A0A0D9SEW6 157 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms