RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 HOXB2P14652 356 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 GOT1P17174 413 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 ERCC2P18074 760 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 KDELR1P24390 212 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 IL1R2P27930 398 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 CNR2P34972 360 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 GGCXP38435 758 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 KIR2DL1P43626 348 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-208ENST00000485618 CCZ1BP86790 482 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 CCZ1P86791 482 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-208ENST00000485618 RAD51Q06609 339 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 SEMA3BQ13214 749 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 FZD5Q13467 585 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 RFTN1Q14699 578 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-208ENST00000485618 RAB6CQ53S08 254 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 INO80DQ53TQ3 878 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-208ENST00000485618 ANKRD20A8PQ5CZ79 823 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 TFDP3Q5H9I0 405 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 FSCBQ5H9T9 825 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 CCDC181Q5TID7 509 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 FAM72AQ5TYM5 149 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 FAM72DQ6L9T8 149 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 CXorf57Q6NSI4 855 aaKnown RBP8.46□□□□□ -1.06
SF3A1-208ENST00000485618 NLRP14Q86W24 1093 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 FAM72BQ86X60 149 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 CIR1Q86X95 450 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-208ENST00000485618 CCDC50Q8IVM0 306 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 KATNAL2Q8IYT4 538 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 PYROXD2Q8N2H3 581 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 CCDC33Q8N5R6 958 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 ALLCQ8N6M5 410 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 IL17RCQ8NAC3 791 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 TSTD1Q8NFU3 115 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 EXD1Q8NHP7 514 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 TRIM44Q96DX7 344 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-208ENST00000485618 CSPG4P5Q96PW8 444 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 PEBP4Q96S96 227 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 KCTD15Q96SI1 283 aaPredicted RBP8.46□□□□□ -1.06
SF3A1-208ENST00000485618 CEP44Q9C0F1 390 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 BRD8Q9H0E9 1235 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 RAB6CQ9H0N0 254 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 LZTFL1Q9NQ48 299 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 TMPRSS4Q9NRS4 437 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 RBM12Q9NTZ6 932 aaKnown RBP8.46□□□□□ -1.06
SF3A1-208ENST00000485618 GPATCH2LQ9NWQ4 482 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 DLL3Q9NYJ7 618 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 BCCIPQ9P287 314 aaKnown RBP eCLIP8.46□□□□□ -1.06
SF3A1-208ENST00000485618 SCML1Q9UN30 329 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 ERVW-1Q9UQF0 538 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 DUSP10Q9Y6W6 482 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 EPG5Q9HCE0 2579 aa8.46□□□□□ -1.06
SF3A1-208ENST00000485618 EDDM13A0A1B0GTR0 161 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 RCCD1A6NED2 376 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 RASA4BC9J798 803 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 I6L893 689 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-208ENST00000485618 APOL1O14791 398 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 TRIM24O15164 1050 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 RASA4O43374 803 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 ZNF217O75362 1048 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 PALMO75781 387 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 EPHX1P07099 455 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 ACADMP11310 421 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 CTNNA2P26232 953 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 MZF1P28698 734 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-208ENST00000485618 CTNNA1P35221 906 aaKnown RBP8.45□□□□□ -1.06
SF3A1-208ENST00000485618 NR2C2P49116 596 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 RENBPP51606 427 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 TAS2R40P59535 323 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 ZBTB16Q05516 673 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 SERINC3Q13530 473 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 DPYSQ14117 519 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 DPYSL3Q14195 570 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 ZNF234Q14588 700 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 RPS6KA1Q15418 735 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 CRY1Q16526 586 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 FUT11Q495W5 492 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 USP39Q53GS9 565 aaKnown RBP8.45□□□□□ -1.06
SF3A1-208ENST00000485618 EMC10Q5UCC4 262 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 FAM46CQ5VWP2 391 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 EGFLAMQ63HQ2 1017 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 TIGD7Q6NT04 549 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-208ENST00000485618 TSSK4Q6SA08 328 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 RFX6Q8HWS3 928 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 PGBD3Q8N328 593 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 FAM71BQ8TC56 605 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 ARHGEF2Q92974 986 aaKnown RBP8.45□□□□□ -1.06
SF3A1-208ENST00000485618 ISG20Q96AZ6 181 aaKnown RBP8.45□□□□□ -1.06
SF3A1-208ENST00000485618 MYEOVQ96EZ4 313 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 LMLNQ96KR4 655 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 ZNF599Q96NL3 588 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 GABRG3Q99928 467 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 ACE2Q9BYF1 805 aaPredicted RBP8.45□□□□□ -1.06
SF3A1-208ENST00000485618 EPC1Q9H2F5 836 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 SP110Q9HB58 689 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 ZSCAN32Q9NX65 697 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 CDV3Q9UKY7 258 aaKnown RBP8.45□□□□□ -1.06
SF3A1-208ENST00000485618 CLEC4EQ9ULY5 219 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 HS3ST2Q9Y278 367 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 NCKAP1Q9Y2A7 1128 aa8.45□□□□□ -1.06
SF3A1-208ENST00000485618 EFR3BQ9Y2G0 817 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms