RNA–Protein interactions for RNA: ENST00000485479.5

APTX-227, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,986 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-227ENST00000485479 SYNPOQ8N3V7 929 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 MDGA1Q8NFP4 955 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 WFIKKN2Q8TEU8 576 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 UCMAQ8WVF2 138 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 ALG3Q92685 438 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 TTC17Q96AE7 1141 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 TNKS2Q9H2K2 1166 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 FAM86C1Q9NVL1 165 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 SAE1Q9UBE0 346 aaPredicted RBP12.16□□□□□ -0.46
APTX-227ENST00000485479 INVSQ9Y283 1065 aa12.16□□□□□ -0.46
APTX-227ENST00000485479 FCF1Q9Y324 198 aaKnown RBP12.16□□□□□ -0.46
APTX-227ENST00000485479 WDR87Q6ZQQ6 2873 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 ILVBLA1L0T0 632 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 J3KR12 359 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 K7ESF4 209 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 FGF10O15520 208 aaPredicted RBP12.15□□□□□ -0.46
APTX-227ENST00000485479 KRT86O43790 486 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 ATP5BP06576 529 aaKnown RBP12.15□□□□□ -0.46
APTX-227ENST00000485479 MAPKAPK2P49137 400 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 ZNF211Q13398 564 aaPredicted RBP12.15□□□□□ -0.46
APTX-227ENST00000485479 POM121L1PQ3SYA9 428 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 NCBP2-AS2Q69YL0 99 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 TMCO3Q6UWJ1 677 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 NPNTQ6UXI9 565 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 Q6ZVU0 165 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 SYT13Q7L8C5 426 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 PEX26Q7Z412 305 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 PSTKQ8IV42 348 aaKnown RBP12.15□□□□□ -0.46
APTX-227ENST00000485479 CCDC50Q8IVM0 306 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 ARHGAP12Q8IWW6 846 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 PQLC3Q8N755 202 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 FRMD1Q8N878 549 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 ATP11CQ8NB49 1132 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 OR6K2Q8NGY2 324 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 HAUS1Q96CS2 278 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 NCAPGQ9BPX3 1015 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 HERPUD2Q9BSE4 406 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 TM6SF2Q9BZW4 377 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 MKRN2Q9H000 416 aaKnown RBP12.15□□□□□ -0.46
APTX-227ENST00000485479 TMEM245Q9H330 911 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 SLC8A2Q9UPR5 921 aa12.15□□□□□ -0.46
APTX-227ENST00000485479 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.15□□□□□ -0.46
APTX-227ENST00000485479 EML5Q05BV3 1969 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 RNF103O00237 685 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 CD160O95971 181 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 SRCP12931 536 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 PAPOLAP51003 745 aaKnown RBP12.14□□□□□ -0.47
APTX-227ENST00000485479 METAP1P53582 386 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 GBE1Q04446 702 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 TCF15Q12870 199 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 ODF2Q5BJF6 829 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 ACBD5Q5T8D3 534 aaPredicted RBP12.14□□□□□ -0.47
APTX-227ENST00000485479 DCAF4L2Q8NA75 395 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 RLN3Q8WXF3 142 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 ACDQ96AP0 544 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 EXOC2Q96KP1 924 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 PPP1R9BQ96SB3 815 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 C2orf49Q9BVC5 232 aaPredicted RBP12.14□□□□□ -0.47
APTX-227ENST00000485479 HEMGNQ9BXL5 484 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 LRRC19Q9H756 370 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 TMEM51Q9NW97 253 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 SLC25A13Q9UJS0 675 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 CKAP5Q14008 2032 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 CHURC1-FNTBB4DL54 471 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 PSTPIP1O43586 416 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 GALR2O43603 387 aaPredicted RBP12.14□□□□□ -0.47
APTX-227ENST00000485479 SIN3BO75182 1162 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 GJB3O75712 270 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 ZMPSTE24O75844 475 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 NDUFV2P19404 249 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 ETFBP38117 255 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 FNTBP49356 437 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 CCR3P51677 355 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 OXCT1P55809 520 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 ST8SIA6P61647 398 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 RFX6Q8HWS3 928 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 UMODL1-AS1Q8N2C9 162 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 PGBD3Q8N328 593 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 FAM160A2Q8N612 972 aaPredicted RBP12.14□□□□□ -0.47
APTX-227ENST00000485479 ZNF557Q8N988 423 aaPredicted RBP12.14□□□□□ -0.47
APTX-227ENST00000485479 TSTD1Q8NFU3 115 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 FAM118BQ9BPY3 351 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 ZNF670Q9BS34 389 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 ACE2Q9BYF1 805 aaPredicted RBP12.14□□□□□ -0.47
APTX-227ENST00000485479 TSGA10Q9BZW7 698 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 CD248Q9HCU0 757 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 PRMT8Q9NR22 394 aaPredicted RBP12.14□□□□□ -0.47
APTX-227ENST00000485479 BCCIPQ9P287 314 aaKnown RBP eCLIP12.14□□□□□ -0.47
APTX-227ENST00000485479 HEY1Q9Y5J3 304 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 R4GN57 208 aa12.14□□□□□ -0.47
APTX-227ENST00000485479 SDK1Q7Z5N4 2213 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 WASH4PA8MWX3 477 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 GABRG2P18507 467 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 GKP32189 559 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 CTNNA1P35221 906 aaKnown RBP12.13□□□□□ -0.47
APTX-227ENST00000485479 DGKEP52429 567 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 PLK1P53350 603 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 SLC10A2Q12908 348 aaPredicted RBP12.13□□□□□ -0.47
APTX-227ENST00000485479 SERINC3Q13530 473 aa12.13□□□□□ -0.47
APTX-227ENST00000485479 SLC12A1Q13621 1099 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms