RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 SNAP91O60641 907 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 MAFKO60675 156 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 PRAMEF11O60813 436 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 ZMPSTE24O75844 475 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 KAT7O95251 611 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 APODP05090 189 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 RBP3P10745 1247 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 GLDCP23378 1020 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 CCNCP24863 283 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 GRIA2P42262 883 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 ATP5OP48047 213 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 CKAP4Q07065 602 aaKnown RBP17.96■□□□□ 0.47
CHMP3-207ENST00000485465 IL10RBQ08334 325 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 PPIDQ08752 370 aaKnown RBP17.96■□□□□ 0.47
CHMP3-207ENST00000485465 MLF2Q15773 248 aaPredicted RBP17.96■□□□□ 0.47
CHMP3-207ENST00000485465 TMEM215Q68D42 235 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 MBLAC2Q68D91 279 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 B4GALNT4Q76KP1 1039 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 LRRN4Q8WUT4 740 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 TFB1MQ8WVM0 346 aaKnown RBP17.96■□□□□ 0.47
CHMP3-207ENST00000485465 TTC17Q96AE7 1141 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 ACDQ96AP0 544 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 NECAB3Q96P71 396 aaPredicted RBP17.96■□□□□ 0.47
CHMP3-207ENST00000485465 WNT16Q9UBV4 365 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 VPS51Q9UID3 782 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 DNPEPQ9ULA0 475 aa17.96■□□□□ 0.47
CHMP3-207ENST00000485465 TCF20Q9UGU0 1960 aaKnown RBP17.96■□□□□ 0.47
CHMP3-207ENST00000485465 TBC1D3BA6NDS4 549 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 SHISA7A6NL88 538 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 PRRT4C9JH25 899 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 J3KR12 359 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 TIMM44O43615 452 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 POLR2EP19388 210 aaKnown RBP17.95■□□□□ 0.46
CHMP3-207ENST00000485465 SULT2A1Q06520 285 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 ZNF33AQ06730 810 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 AP1B1Q10567 949 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 SNX1Q13596 522 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 BYSLQ13895 437 aaKnown RBP17.95■□□□□ 0.46
CHMP3-207ENST00000485465 PRKD1Q15139 912 aaPredicted RBP17.95■□□□□ 0.46
CHMP3-207ENST00000485465 PON2Q15165 354 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 CYP1B1Q16678 543 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 SLC45A4Q5BKX6 768 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 DRICH1Q6PGQ1 229 aaPredicted RBP17.95■□□□□ 0.46
CHMP3-207ENST00000485465 DARS2Q6PI48 645 aaKnown RBP17.95■□□□□ 0.46
CHMP3-207ENST00000485465 TPRG1Q6ZUI0 275 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 NUDT18Q6ZVK8 323 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 ZNF572Q7Z3I7 529 aaPredicted RBP17.95■□□□□ 0.46
CHMP3-207ENST00000485465 CDKL3Q8IVW4 592 aaPredicted RBP17.95■□□□□ 0.46
CHMP3-207ENST00000485465 C12orf50Q8NA57 414 aaPredicted RBP17.95■□□□□ 0.46
CHMP3-207ENST00000485465 NKD2Q969F2 451 aaPredicted RBP17.95■□□□□ 0.46
CHMP3-207ENST00000485465 QKIQ96PU8 341 aaKnown RBP eCLIP17.95■□□□□ 0.462e-7■■■■□ 25.7
CHMP3-207ENST00000485465 SP110Q9HB58 689 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 ELOVL2Q9NXB9 296 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 MUTYHQ9UIF7 546 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 CA14Q9ULX7 337 aa17.95■□□□□ 0.46
CHMP3-207ENST00000485465 KIAA1549LQ6ZVL6 1849 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 BCLAF3A2AJT9 711 aaKnown RBP17.94■□□□□ 0.46
CHMP3-207ENST00000485465 ZSCAN5CA6NGD5 496 aaPredicted RBP17.94■□□□□ 0.46
CHMP3-207ENST00000485465 MAN2B1O00754 1011 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 CTSOP43234 321 aaPredicted RBP17.94■□□□□ 0.46
CHMP3-207ENST00000485465 TNFRSF4P43489 277 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 ARF5P84085 180 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 ECT2LQ008S8 904 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 PRKCQQ04759 706 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 EIF4HQ15056 248 aaKnown RBP17.94■□□□□ 0.46
CHMP3-207ENST00000485465 OASLQ15646 514 aaKnown RBP17.94■□□□□ 0.46
CHMP3-207ENST00000485465 TMEM196Q5HYL7 178 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 TIGD7Q6NT04 549 aaPredicted RBP17.94■□□□□ 0.46
CHMP3-207ENST00000485465 RETSATQ6NUM9 610 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 SFTPA1Q8IWL2 248 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 CCDC13Q8IYE1 715 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 FAM3CQ92520 227 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 FATE1Q969F0 183 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 MAGOHBQ96A72 148 aaKnown RBP17.94■□□□□ 0.46
CHMP3-207ENST00000485465 CIPCQ9C0C6 399 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 C10orf88Q9H8K7 445 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 PDFQ9HBH1 243 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 ARHGEF3Q9NR81 526 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 FBXL21Q9UKT6 434 aa17.94■□□□□ 0.46
CHMP3-207ENST00000485465 DRG1Q9Y295 367 aaKnown RBP17.94■□□□□ 0.46
CHMP3-207ENST00000485465 CXorf51AA0A1B0GTR3 108 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 CCDC188H7C350 402 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 MATN3O15232 486 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 PHF2O75151 1096 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 PEX11BO96011 259 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 ASLP04424 464 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 ATP5BP06576 529 aaKnown RBP17.93■□□□□ 0.46
CHMP3-207ENST00000485465 VAV1P15498 845 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 RBL1P28749 1068 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 SLC20A2Q08357 652 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 GRSF1Q12849 480 aaKnown RBP eCLIP17.93■□□□□ 0.46
CHMP3-207ENST00000485465 FSTL4Q6MZW2 842 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 LINGO4Q6UY18 593 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 LEKR1Q6ZMV7 388 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 SPATA4Q8NEY3 305 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 SORCS1Q8WY21 1168 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 ZNF599Q96NL3 588 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 ERVW-1Q9UQF0 538 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 CHD5Q8TDI0 1954 aa17.93■□□□□ 0.46
CHMP3-207ENST00000485465 NYNRINQ9P2P1 1898 aaKnown RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms