RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 PSMD8P48556 350 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 ADPRHP54922 357 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 SLC8A3P57103 927 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 INCA1Q0VD86 236 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 OVGP1Q12889 678 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 ZNF211Q13398 564 aaPredicted RBP8.83□□□□□ -1
DDX39B-221ENST00000484566 RABEP1Q15276 862 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 TRIP4Q15650 581 aaPredicted RBP8.83□□□□□ -1
DDX39B-221ENST00000484566 HNRNPA1L2Q32P51 320 aaKnown RBP8.83□□□□□ -1
DDX39B-221ENST00000484566 SND1Q7KZF4 910 aaKnown RBP eCLIP8.83□□□□□ -1
DDX39B-221ENST00000484566 IQCHQ86VS3 1027 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 MMAAQ8IVH4 418 aaKnown RBP8.83□□□□□ -1
DDX39B-221ENST00000484566 CCDC117Q8IWD4 279 aaPredicted RBP8.83□□□□□ -1
DDX39B-221ENST00000484566 C12orf56Q8IXR9 622 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 MFSD2AQ8NA29 543 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 OR14C36Q8NHC7 312 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 PARD3BQ8TEW8 1205 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 STK32AQ8WU08 396 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 RNF139Q8WU17 664 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 SNRNP27Q8WVK2 155 aaKnown RBP8.83□□□□□ -1
DDX39B-221ENST00000484566 VCPIP1Q96JH7 1222 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 TMX3Q96JJ7 454 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 TWNKQ96RR1 684 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 CUEDC2Q9H467 287 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 POLR1BQ9H9Y6 1135 aa8.83□□□□□ -1
DDX39B-221ENST00000484566 HBS1LQ9Y450 684 aaKnown RBP8.83□□□□□ -1
DDX39B-221ENST00000484566 TDRD6O60522 2096 aaKnown RBP8.83□□□□□ -1
DDX39B-221ENST00000484566 SPENQ96T58 3664 aaKnown RBP8.82□□□□□ -1
DDX39B-221ENST00000484566 TBC1D3DA0A087WVF3 549 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 TBC1D3IA0A087WXS9 549 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 A0A087X0B3 334 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 TBC1D3EA0A087X179 549 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 TBC1D3KA0A087X1G2 549 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 TBC1D3FA6NER0 549 aaPredicted RBP8.82□□□□□ -1
DDX39B-221ENST00000484566 TBC1D3LB9A6J9 549 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 K7ENP7 123 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 WNT9AO14904 365 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 TBL1XO60907 577 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 CSO75390 466 aaKnown RBP8.82□□□□□ -1
DDX39B-221ENST00000484566 ASS1P00966 412 aaKnown RBP8.82□□□□□ -1
DDX39B-221ENST00000484566 TBC1D3HP0C7X1 549 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 ALPPL2P10696 532 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 CD58P19256 250 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 SLC8A1P32418 973 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 CD70P32970 193 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 NUDT1P36639 197 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 PPP2CBP62714 309 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 PPP2CAP67775 309 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 CEBPZQ03701 1054 aaKnown RBP8.82□□□□□ -1
DDX39B-221ENST00000484566 EHHADHQ08426 723 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 NFATC3Q12968 1075 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 KCNJ12Q14500 433 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 STAT4Q14765 748 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 ZACNQ401N2 412 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 SGO2Q562F6 1265 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 MPP7Q5T2T1 576 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 ADGRF1Q5T601 910 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 TMEM164Q5U3C3 297 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 CDCP2Q5VXM1 449 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 KIAA1614Q5VZ46 1190 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 TBC1D3GQ6DHY5 549 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 TBC1D3CQ6IPX1 549 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 SPOPLQ6IQ16 392 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 INO80CQ6PI98 192 aaPredicted RBP8.82□□□□□ -1
DDX39B-221ENST00000484566 CCDC81Q6ZN84 652 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 KANSL1Q7Z3B3 1105 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 KIAA0907Q7Z7F0 614 aaPredicted RBP8.82□□□□□ -1
DDX39B-221ENST00000484566 PRPF39Q86UA1 669 aaKnown RBP8.82□□□□□ -1
DDX39B-221ENST00000484566 MFN1Q8IWA4 741 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 ZC3H3Q8IXZ2 948 aaKnown RBP8.82□□□□□ -1
DDX39B-221ENST00000484566 TBC1D3Q8IZP1 549 aaPredicted RBP8.82□□□□□ -1
DDX39B-221ENST00000484566 CCDC150Q8NCX0 1101 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 PLEKHO2Q8TD55 490 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 ANP32BQ92688 251 aaKnown RBP8.82□□□□□ -1
DDX39B-221ENST00000484566 CEP63Q96MT8 703 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.82□□□□□ -1
DDX39B-221ENST00000484566 ABCG4Q9H172 646 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 MTG2Q9H4K7 406 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 CYP3A43Q9HB55 503 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 STOML2Q9UJZ1 356 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 GDF2Q9UK05 429 aaPredicted RBP8.82□□□□□ -1
DDX39B-221ENST00000484566 PRDM4Q9UKN5 801 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 DMTF1Q9Y222 760 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 CEP83Q9Y592 693 aa8.82□□□□□ -1
DDX39B-221ENST00000484566 TLN1Q9Y490 2541 aaKnown RBP8.82□□□□□ -1
DDX39B-221ENST00000484566 EDDM13A0A1B0GTR0 161 aa8.81□□□□□ -1
DDX39B-221ENST00000484566 TARSL2A2RTX5 802 aaKnown RBP8.81□□□□□ -1
DDX39B-221ENST00000484566 TRIM38O00635 465 aa8.81□□□□□ -1
DDX39B-221ENST00000484566 FFAR2O15552 330 aa8.81□□□□□ -1
DDX39B-221ENST00000484566 LATO43561 262 aa8.81□□□□□ -1
DDX39B-221ENST00000484566 OPA1O60313 960 aa8.81□□□□□ -1
DDX39B-221ENST00000484566 MOCS3O95396 460 aa8.81□□□□□ -1
DDX39B-221ENST00000484566 ZBED1O96006 694 aa8.81□□□□□ -1
DDX39B-221ENST00000484566 GP1BAP07359 652 aa8.81□□□□□ -1
DDX39B-221ENST00000484566 CKMT1AP12532 417 aa8.81□□□□□ -1
DDX39B-221ENST00000484566 KRT10P13645 584 aa8.81□□□□□ -1
DDX39B-221ENST00000484566 GOT1P17174 413 aa8.81□□□□□ -1
DDX39B-221ENST00000484566 C5AR1P21730 350 aa8.81□□□□□ -1
DDX39B-221ENST00000484566 ELAVL4P26378 380 aaKnown RBP8.81□□□□□ -1
DDX39B-221ENST00000484566 CSKP41240 450 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms