RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 SUSD2Q9UGT4 822 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 VPS51Q9UID3 782 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 SCML1Q9UN30 329 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 SLCO1B1Q9Y6L6 691 aa13.23□□□□□ -0.29
HDAC1-209ENST00000484305 ILVBLA1L0T0 632 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 ANKRD62A6NC57 917 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 GOLGA6L19H0YKK7 550 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 K7ERQ8 282 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 ARHGAP33O14559 1287 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 ATMINO43313 823 aaPredicted RBP13.22□□□□□ -0.29
HDAC1-209ENST00000484305 SRCP12931 536 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 GNSP15586 552 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 GLDCP23378 1020 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 METAP1P53582 386 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 OGDHQ02218 1023 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 NRG1Q02297 640 aaPredicted RBP13.22□□□□□ -0.29
HDAC1-209ENST00000484305 KLHL30Q0D2K2 578 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 UAP1L1Q3KQV9 507 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 FIGNQ5HY92 759 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 C6orf118Q5T5N4 469 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 DAB2IPQ5VWQ8 1189 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 DCUN1D2Q6PH85 259 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 LINGO4Q6UY18 593 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 Q6ZVU0 165 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 DRC7Q8IY82 874 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 PYROXD2Q8N2H3 581 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 AADATQ8N5Z0 425 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 DCAF4L2Q8NA75 395 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 OR2I1PQ8NGU4 316 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 C1orf216Q8TAB5 229 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 SNX19Q92543 992 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 BIRC7Q96CA5 298 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 OMDQ99983 421 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 C2orf49Q9BVC5 232 aaPredicted RBP13.22□□□□□ -0.29
HDAC1-209ENST00000484305 GTPBP2Q9BX10 602 aaKnown RBP13.22□□□□□ -0.29
HDAC1-209ENST00000484305 SGK2Q9HBY8 427 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 NDFIP2Q9NV92 336 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 SARDHQ9UL12 918 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 NEU3Q9UQ49 428 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 HS3ST2Q9Y278 367 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 NCKAP1Q9Y2A7 1128 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 ZBTB32Q9Y2Y4 487 aaPredicted RBP13.22□□□□□ -0.29
HDAC1-209ENST00000484305 NCOR2Q9Y618 2525 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 PLXNA2O75051 1894 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 DOCK9Q9BZ29 2069 aa13.22□□□□□ -0.29
HDAC1-209ENST00000484305 KNL1Q8NG31 2342 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 A0A1B0GTW7 788 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 DDX3XO00571 662 aaKnown RBP eCLIP13.21□□□□□ -0.29
HDAC1-209ENST00000484305 BCAT2O15382 392 aaPredicted RBP13.21□□□□□ -0.29
HDAC1-209ENST00000484305 SMAD6O43541 496 aaKnown RBP13.21□□□□□ -0.29
HDAC1-209ENST00000484305 BNIP3LO60238 219 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 RNASEH2AO75792 299 aaKnown RBP13.21□□□□□ -0.29
HDAC1-209ENST00000484305 LRIG2O94898 1065 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 FSBPO95073 299 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 KCNK5O95279 499 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 ADH1BP00325 375 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 IL1BP01584 269 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 FTLP02792 175 aaPredicted RBP13.21□□□□□ -0.29
HDAC1-209ENST00000484305 PLEKP08567 350 aaPredicted RBP13.21□□□□□ -0.29
HDAC1-209ENST00000484305 GZMAP12544 262 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 C5AR1P21730 350 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 GALCP54803 685 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 GNA12Q03113 381 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 MAMLD1Q13495 774 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 PLEKHA7Q6IQ23 1121 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 RWDD4Q6NW29 188 aaKnown RBP13.21□□□□□ -0.29
HDAC1-209ENST00000484305 SCYL2Q6P3W7 929 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 LRSAM1Q6UWE0 723 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 SLFN11Q7Z7L1 901 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 NLRP14Q86W24 1093 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 ATP11CQ8NB49 1132 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 NTAN1Q96AB6 310 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 CNPY3Q9BT09 278 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 SPON2Q9BUD6 331 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 IFNKQ9P0W0 207 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 ADAMTS1Q9UHI8 967 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 FZD4Q9ULV1 537 aa13.21□□□□□ -0.29
HDAC1-209ENST00000484305 A0A1W2PQJ5 194 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 FAM47DPA6NHR8 397 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 CBX4O00257 560 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 PLK4O00444 970 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 MCF2LO15068 1137 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 ZMPSTE24O75844 475 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 IGHV4-34P06331 123 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 SYPP08247 313 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 GOT1P17174 413 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 DRD3P35462 400 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 ATXN3P54252 364 aaPredicted RBP13.2□□□□□ -0.3
HDAC1-209ENST00000484305 SCAPQ12770 1279 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 SFSWAPQ12872 951 aaKnown RBP13.2□□□□□ -0.3
HDAC1-209ENST00000484305 HGSNATQ68CP4 663 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 PPP1R2P3Q6NXS1 205 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 NCEH1Q6PIU2 408 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.2□□□□□ -0.3
HDAC1-209ENST00000484305 ZNF783Q6ZMS7 281 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 TMC6Q7Z403 805 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 HDDC3Q8N4P3 179 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 MINDY1Q8N5J2 469 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 CPLX3Q8WVH0 158 aa13.2□□□□□ -0.3
HDAC1-209ENST00000484305 OR8D1Q8WZ84 308 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms