RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 CLDN6P56747 220 aa18.51■□□□□ 0.55
ATG4B-221ENST00000483778 SULT2A1Q06520 285 aa18.51■□□□□ 0.55
ATG4B-221ENST00000483778 BNIP3Q12983 259 aa18.51■□□□□ 0.55
ATG4B-221ENST00000483778 RAPGEF1Q13905 1077 aa18.51■□□□□ 0.55
ATG4B-221ENST00000483778 TTC39BQ5VTQ0 682 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-221ENST00000483778 SPATS2Q86XZ4 545 aaKnown RBP18.51■□□□□ 0.55
ATG4B-221ENST00000483778 SH2D3CQ8N5H7 860 aa18.51■□□□□ 0.55
ATG4B-221ENST00000483778 SPAG5Q96R06 1193 aa18.51■□□□□ 0.55
ATG4B-221ENST00000483778 NAA15Q9BXJ9 866 aaKnown RBP18.51■□□□□ 0.55
ATG4B-221ENST00000483778 TKTL2Q9H0I9 626 aa18.51■□□□□ 0.55
ATG4B-221ENST00000483778 SYNCQ9H7C4 482 aa18.51■□□□□ 0.55
ATG4B-221ENST00000483778 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.51■□□□□ 0.55
ATG4B-221ENST00000483778 MPP6Q9NZW5 540 aa18.51■□□□□ 0.55
ATG4B-221ENST00000483778 CA5BQ9Y2D0 317 aa18.51■□□□□ 0.55
ATG4B-221ENST00000483778 COL5A1P20908 1838 aaPredicted RBP18.51■□□□□ 0.55
ATG4B-221ENST00000483778 CHD5Q8TDI0 1954 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 CELSR3Q9NYQ7 3312 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 SMAD6O43541 496 aaKnown RBP18.5■□□□□ 0.55
ATG4B-221ENST00000483778 BNIP3LO60238 219 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 CTSLP07711 333 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 CYP11B1P15538 503 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 GLDCP23378 1020 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 CDH5P33151 784 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-221ENST00000483778 GABRB2P47870 512 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 VASPP50552 380 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-221ENST00000483778 TAS2R38P59533 333 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 C19orf48Q6RUI8 117 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 NOP9Q86U38 636 aaKnown RBP18.5■□□□□ 0.55
ATG4B-221ENST00000483778 XYLT1Q86Y38 959 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 PIP4K2CQ8TBX8 421 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 NOX5Q96PH1 765 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 ELF4Q99607 663 aaPredicted RBP18.5■□□□□ 0.55
ATG4B-221ENST00000483778 WDCPQ9H6R7 721 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 CHMP5Q9NZZ3 219 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 VPS28Q9UK41 221 aa18.5■□□□□ 0.55
ATG4B-221ENST00000483778 A0A0D9SEW6 157 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 DRGXA6NNA5 263 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 TLR4O00206 839 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 MCF2LO15068 1137 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 CLDN11O75508 207 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 SRCP12931 536 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 FLT3P36888 993 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 KLK7P49862 253 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 SULT1E1P49888 294 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 SFSWAPQ12872 951 aaKnown RBP18.49■□□□□ 0.55
ATG4B-221ENST00000483778 DNAJC3Q13217 504 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 CAMK2BQ13554 666 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 AGBL4Q5VU57 503 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 LRSAM1Q6UWE0 723 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 DHRS13Q6UX07 377 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 LINGO4Q6UY18 593 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 TMEM35BQ8NCS4 154 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 SAP25Q8TEE9 199 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 CPA5Q8WXQ8 436 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 OR8D1Q8WZ84 308 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 KLK6Q92876 244 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 C18orf8Q96DM3 657 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 MAGEB5Q9BZ81 275 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 VPS51Q9UID3 782 aa18.49■□□□□ 0.55
ATG4B-221ENST00000483778 LAMA5O15230 3695 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 TRABD2BA6NFA1 517 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 GOLGA8SH3BPF8 625 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 PLRG1O43660 514 aaKnown RBP18.48■□□□□ 0.55
ATG4B-221ENST00000483778 MMEP08473 750 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 RRM1P23921 792 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 CDH4P55283 916 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 OXCT1P55809 520 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 NXPH1P58417 271 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 DEUP1Q05D60 604 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 KANSL1Q7Z3B3 1105 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 TFAP2DQ7Z6R9 452 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 PHLDB2Q86SQ0 1253 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 ERICH1Q86X53 443 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 EID2Q8N6I1 236 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 CHST14Q8NCH0 376 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 OR7D4Q8NG98 312 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 SLC20A1Q8WUM9 679 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 ARRDC3Q96B67 414 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 MUC3BQ9H195 1237 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 CCDC86Q9H6F5 360 aaKnown RBP18.48■□□□□ 0.55
ATG4B-221ENST00000483778 SLC25A13Q9UJS0 675 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 TMEM59LQ9UK28 342 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 LHX6Q9UPM6 363 aa18.48■□□□□ 0.55
ATG4B-221ENST00000483778 ASXL3Q9C0F0 2248 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 DFNA5O60443 496 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 UCHL3P15374 230 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 ZNF18P17022 549 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 ERCC5P28715 1186 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-221ENST00000483778 BPIFB4P59827 614 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 SLC25A52Q3SY17 297 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 BRMS1LQ5PSV4 323 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 FAM102AQ5T9C2 384 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-221ENST00000483778 BNIPLQ7Z465 357 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 FAM114A1Q8IWE2 563 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 OR2A12Q8NGT7 310 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 PGAP3Q96FM1 320 aaPredicted RBP18.47■□□□□ 0.55
ATG4B-221ENST00000483778 CFAP57Q96MR6 1250 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 PDCL3Q9H2J4 239 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 TAB2Q9NYJ8 693 aa18.47■□□□□ 0.55
ATG4B-221ENST00000483778 ZNF212Q9UDV6 495 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms